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Created with Raphaël 2.2.016Dec1514626Nov1715131211109829Oct28130Sep241723Aug20181029Jul2721201998752130Jun2928252221161514111072131May2825211920Apr1514131230Mar29252322191817118424Feb22211918169428Jan21158628Dec24221615119130Nov272625191712111096543230Oct2827262216151312987652129Sep24232116151411109742126Aug2420191817141312111076529Jul2827232221201716151397632130Jun29262524232219181716151211109854update changelogsamtoolsAddOpti…samtoolsAddOptionalIndexFileAsInputMerge branch 'develop' into samtoolsAddOptionalIndexFileAsInputadd annotateBamWithUmiadd umiAwareMarkDuplicateUse mamba-forge and mamba to install dependenciesMerge pull request #295 from biowdl/BIOWDL-576More correct evaluation of controlBams inputUpdate changelogAdd time minutes parameterAdd parameter_meta for macs2Require 5 minutesBIOWDL-576BIOWDL-576Add sampleposition in array taskgive dictionary and index to virusbreakendMerge branch 'develop' into samtoolsAddOptionalIndexFileAsInputmake recovery sv vcf optional in purplegridss more memorychange gridss runtime settingsuse alternative gridss image for virusbreakendincrease gridss memoryincrease memory gridssupgrade gridss to 2.12.2try version 2.11.1 for gridssadd img input for virusbreakendMerge pull request #293 from leipzig/patch-1Merge pull request #1 from leipzig/patch-2Update CHANGELOG.mdUpdate chunked-scatter.wdlincrease memory for sambamba markdupMerge pull request #292 from biowdl/famm-runupdate changelogupdate CHANGELOGfamm-runfamm-runMerge branch 'develop' into famm-runadjust resource settingsfix protect command with multiple doidsmodify samtools: optional index file as inputupdate bcftools.wdkfix incorrect typeupdate bedtools version for coverageadd deconstructSigs taskadd bedtools coverage