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Created with Raphaël 2.2.01Jul27Jun26252421201918171413121165429May2723222120151397629Apr262524231817161585429Mar2521201918141312875126Feb252221201918141174121Jan8731Dec241312117654329Nov272623222115131298752129Oct2625242322191817169827Sep2625241817131210643231Aug2928272423222120171615109863231Jul30272625242319181716131153228Jun2120191814modify clever.wdl: replaced string "6G" to integer 6 in memory runtimeMerge branch 'develop' into KG-295dockerimage htseq collect-collumnsremove structstringtie to dockerImagehisat2 dockerImageMerge branch 'BIOWDL-247' of https://github.com/biowdl/tasks into BIOWDL-247dockerImage starMerge branch 'BIOWDL-247' of https://github.com/biowdl/tasks into BIOWDL-247dockerimage for multiqcmodify clever.wdl: add 6G memory in runtimemodify delly.wdl: add 6G memory in runtimemake sure dirs existadd reference fasta indexremove structsadd index file to vardictremove structsadd fasta indexreStructuring. Get it? Struct! Hahahaha.dockerImage somaticseqadd dockerImagemove to dockerImagesfix inputremove structremove struct inputadd preAdapterSummarydockerImage for samtoolsadd dockerImagesMarkduplicates dockerimageMerge branch 'BIOWDL-247' of https://github.com/biowdl/tasks into BIOWDL-247typodocker image for cutadapt and fastqccreate dockerImage stuffset core usageadd fastqsplittermodify tasks/picard.wdl: add renameSample taskmodify manta.wdl: deleted duplicatesmodified: manta.wdl, add germline task for SV pipelineadd SV task: survivor.wdladd SV task: delly.wdl