Commits · f4fee79b3e26f11c9b6dce07a64e517596a6ca78 · biowdl / tasks

Oct 30, 2020
- Update first set of tasks to uniform layout. · f4fee79b
  JasperBoom authored 4 years ago
  
  f4fee79b
Oct 12, 2020
- add tmpDir to parameter_meta section · 72ad1f1b
  cagaser authored 4 years ago
  
  72ad1f1b
- add tmpDir input to specify temporary directory when sorting. · 15343889
  cagaser authored 4 years ago
  
  15343889
Oct 09, 2020
- remove outputType and indexing instead based on extension of the file · 7c065d40
  cagaser authored 4 years ago
  
  7c065d40
Sep 10, 2020
- add paramter meta compressionLevel · a651adc5
  cagaser authored 4 years ago
  
  a651adc5
Sep 07, 2020
- made output extension depends on compression level · 5781179d
  cagaser authored 4 years ago
  
  5781179d
- make bcftools indexing optional · 7bc3c58d
  cagaser authored 4 years ago
  
  7bc3c58d
Aug 14, 2020
- add output {} · f07a59ae
  cagaser authored 4 years ago
  
  f07a59ae
- add bcftools sort · 1241b96f
  cagaser authored 4 years ago
  
  1241b96f
- add bcftools annotate · 31b21e1e
  cagaser authored 4 years ago
  
  31b21e1e
Aug 06, 2020
- add missing category for outputType in bcftools view · d1922724
  Cats authored 4 years ago
  
  Unverified
  
  d1922724
Jul 20, 2020
- Remove redundant newline. · 633c58b2
  Ruben Vorderman authored 4 years ago
  
  Co-authored-by: Jasper <jboom@infernum.nl>
  Unverified
  
  633c58b2
- Add missing interpunction. · 9826e25a
  Ruben Vorderman authored 4 years ago
  
  Co-authored-by: Jasper <jboom@infernum.nl>
  Unverified
  
  9826e25a
Jul 17, 2020
- fix view task · 631b5dfa
  Ruben Vorderman authored 4 years ago
  
  631b5dfa
- Overhaul view task · 86cd2038
  Ruben Vorderman authored 4 years ago
  
  86cd2038
- update docker image · 77b3d960
  Ruben Vorderman authored 4 years ago
  
  77b3d960
- update default images · 1308c181
  Ruben Vorderman authored 4 years ago
  
  1308c181
Jul 06, 2020
- use less memory on bcftools stats. · 46ea0ef3
  Ruben Vorderman authored 4 years ago
  
  46ea0ef3
Jun 08, 2020
- complete parameter_meta for bcf tools · f2c1d5ba
  Ruben Vorderman authored 4 years ago
  
  f2c1d5ba
Jun 05, 2020
- fix stats task · 2eca5b51
  Ruben Vorderman authored 4 years ago
  
  2eca5b51
May 28, 2020
- add dockerimage · 12420e38
  Ruben Vorderman authored 4 years ago
  
  12420e38
- add bcftools stats · 63202c73
  Ruben Vorderman authored 4 years ago
  
  63202c73
Apr 08, 2020
- even more time_minutes · 605bba8d
  Cats authored 5 years ago
  
  605bba8d
Apr 07, 2020
- time_minutes · 1e71e46d
  Cats authored 5 years ago
  
  1e71e46d
Feb 13, 2020
- modify outputPath category from required to common · 19736000
  cedrick authored 5 years ago
  
  19736000
Feb 12, 2020
- add default outputPath · 91a5cdd2
  cedrick authored 5 years ago
  
  91a5cdd2
- fix parameter_meta · 1a77dc8f
  cedrick authored 5 years ago
  
  1a77dc8f
- fix parameter_meta · 3ec2d054
  cedrick authored 5 years ago
  
  3ec2d054
- add copyright header · ce0699c2
  cedrick authored 5 years ago
  
  ce0699c2
Feb 11, 2020
- add missing parameter_meta · 9ec5ab9d
  cedrick authored 5 years ago
  
  9ec5ab9d
- Reorder a few things · 338f8533
  JasperBoom authored 5 years ago
  
  338f8533
Feb 10, 2020
- changed OutputVcf to outputVcf · 5d2c1b22
  cedrick authored 5 years ago
  
  5d2c1b22
Feb 07, 2020
- fix some sytax styles · 094f4a7a
  cagaser authored 5 years ago
  
  094f4a7a
- fix writings according to bioWDL guidelines · 2d90e2ef
  cagaser authored 5 years ago
  
  2d90e2ef
- make dockerimages configurable · ceb49be2
  cagaser authored 5 years ago
  
  ceb49be2
Jun 21, 2019
- add SV task: bcftools.wdl · 32e7a8bf
  cagaser authored 5 years ago
  
  32e7a8bf