Commits · af73c53935206dd54b37079e1c8d6a5b053c4a46 · biowdl / tasks

Aug 11, 2020
- Change inputs to arrays. · af73c539
  JasperBoom authored 4 years ago
  
  af73c539
- Change lima outputs. · 01df29ba
  JasperBoom authored 4 years ago
  
  01df29ba
- Merge branch 'develop' into BIOWDL-487 · 16046798
  Jasper authored 4 years ago
  
  Unverified
  
  16046798
- Fix index localization. · 710cb796
  JasperBoom authored 4 years ago
  
  710cb796
- Merge pull request #236 from biowdl/gridss · 2fbdf6aa
  Cedrick Agaser authored 4 years ago
  
  add gridss task
  Unverified
  
  2fbdf6aa
- update CHANGELOG · 10236b50
  Cats authored 4 years ago
  
  10236b50
- Merge branch 'develop' into gridss · 7753b2ad
  Cats authored 4 years ago
  
  Unverified
  
  7753b2ad
- Merge pull request #239 from biowdl/BIOWDL-487 · cdcb3c06
  Jasper authored 4 years ago
  
  BIOWDL-487: Add pacbio bam2fastx tool.
  Unverified
  
  cdcb3c06
- Remove uncompressed output options. · adac77e5
  JasperBoom authored 4 years ago
  
  adac77e5
Aug 10, 2020
- Remove left-over chmod. · 4da76be8
  JasperBoom authored 4 years ago
  
  4da76be8
- Add missing · 628b9169
  JasperBoom authored 4 years ago
  
  ".
  628b9169
- Add index input to the tasks. · aea639c8
  JasperBoom authored 4 years ago
  
  aea639c8
Aug 07, 2020
- Correct output naming. · 9ad94257
  JasperBoom authored 4 years ago
  
  9ad94257
- Add pacbio bam2fastx tool. · 8591feb0
  JasperBoom authored 4 years ago
  
  8591feb0
Aug 06, 2020
- add missing category for outputType in bcftools view · d1922724
  Cats authored 4 years ago
  
  Unverified
  
  d1922724
Aug 05, 2020
- setting next version · 5d5a335a
  Cats authored 4 years ago
  
  5d5a335a
- set version in changelog to stable version · d1e2d6e5
  Cats authored 4 years ago
  
  View commits for tag v4.0.0 v4.0.0
  
  d1e2d6e5
- update scripts · 0ecfa670
  Cats authored 4 years ago
  
  0ecfa670
Jul 29, 2020
- fix parameter_meta · 82f0cc79
  Cats authored 4 years ago
  
  82f0cc79
- add parameter_meta to gridss · 247561f6
  Cats authored 4 years ago
  
  247561f6
- update changelog · 94128f4f
  Cats authored 4 years ago
  
  94128f4f
- Merge remote-tracking branch 'origin/develop' into gridss · 3745d4d7
  Cats authored 4 years ago
  
  3745d4d7
- Merge pull request #235 from biowdl/KG-549 · f2546aa7
  Ruben Vorderman authored 4 years ago
  
  Last tweaks before release
  Unverified
  
  f2546aa7
- update changelog · be890eb5
  Ruben Vorderman authored 4 years ago
  
  be890eb5
- Update default cutadapt image · ed49efcb
  Ruben Vorderman authored 4 years ago
  
  ed49efcb
Jul 28, 2020
- add gridss task · 9a9bf3f5
  Cats authored 4 years ago
  
  9a9bf3f5
- Set compression level to 1 and higher time estimate for mergevcf task · 6eb33c3d
  Ruben Vorderman authored 4 years ago
  
  6eb33c3d
Jul 23, 2020
- Merge pull request #233 from biowdl/bwasortthreads · bf2590ca
  Ruben Vorderman authored 4 years ago
  
  Increase the number of sorting threads to prevent pipe blocks in aligners.
  Unverified
  
  bf2590ca
Jul 22, 2020
- update changelog · 15c960d2
  Ruben Vorderman authored 4 years ago
  
  15c960d2
- correct memory selection · f6bf488f
  Ruben Vorderman authored 4 years ago
  
  f6bf488f
- Bring changes to hisat2 too · ccbb50c1
  Ruben Vorderman authored 4 years ago
  
  ccbb50c1
- Merge branch 'develop' into bwasortthreads · 34df25d9
  Ruben Vorderman authored 4 years ago
  
  34df25d9
- Merge pull request #232 from biowdl/BIOWDL-487 · 46f90dc3
  Jasper authored 4 years ago
  
  BIOWDL-487: Update output names for the first set of tasks.
  Unverified
  
  46f90dc3
- Update CHANGELOG. · fd4e8619
  JasperBoom authored 4 years ago
  
  fd4e8619
- Fix tests. · d8a159f3
  JasperBoom authored 4 years ago
  
  d8a159f3
- Update CHANGELOG. · 5010738c
  JasperBoom authored 4 years ago
  
  5010738c
- Fix tests. · fe7b8a1e
  JasperBoom authored 4 years ago
  
  fe7b8a1e
- Fix some input naming. · 5e572ffc
  JasperBoom authored 4 years ago
  
  5e572ffc
- Fix tests. · 7e8c833e
  JasperBoom authored 4 years ago
  
  7e8c833e
- Fix last set of tasks. · 4fbfe713
  JasperBoom authored 4 years ago
  
  4fbfe713