Commits · 8899e8c407b38d58703c32a574f46e62f116378e · biowdl / tasks

Dec 06, 2018
- higher memory for htseqcount · 8899e8c4
  Ruben Vorderman authored 6 years ago
  
  8899e8c4
- saner defaults for star · 909fe66b
  Ruben Vorderman authored 6 years ago
  
  909fe66b
Dec 05, 2018
- Merge pull request #80 from biowdl/samtoolsMAPQ · 6caf6872
  Cats authored 6 years ago
  
  Add argument for filtering on MAPQ (alignment quality) for View task
  6caf6872
- Merge branch 'develop' into samtoolsMAPQ · a9dbe4ef
  Cats authored 6 years ago
  
  a9dbe4ef
Dec 04, 2018
- Add argument for filtering on MAPQ (alignment quality) for View task · 267d4e02
  Moustakas authored 6 years ago
  
  267d4e02
- Merge pull request #79 from biowdl/fix-fr-option-stringtie · 46f495de
  Ruben Vorderman authored 6 years ago
  
  Update stringtie.wdl
  46f495de
- Update stringtie.wdl · 439915b2
  Cats authored 6 years ago
  
  439915b2
Dec 03, 2018
- Merge pull request #78 from biowdl/macs2Biocontainer · 5e78f75b
  Cats authored 6 years ago
  
  Macs2 biocontainer
  5e78f75b
Nov 29, 2018
- Run macs2 from docker · 45777c74
  Moustakas authored 6 years ago
  
  45777c74
- Merge remote-tracking branch 'origin/develop' into develop · c76870e2
  Moustakas authored 6 years ago
  
  c76870e2
- Setting version to 0.3-SNAPSHOT · 541f8736
  Ruben Vorderman authored 6 years ago
  
  541f8736
- Setting version to 0.2 · 221aab4c
  Ruben Vorderman authored 6 years ago
  
  View commits for tag v0.2 v0.2
  
  221aab4c
Nov 27, 2018
- Merge pull request #77 from biowdl/BIOWDL-139 · 9b30faa1
  Ruben Vorderman authored 6 years ago
  
  Add yamltojson task.
  9b30faa1
- update YamlToJson to work · 732a9aa1
  Ruben Vorderman authored 6 years ago
  
  732a9aa1
Nov 26, 2018
- add yamltojson task · 6c40607e
  Ruben Vorderman authored 6 years ago
  
  6c40607e
- Merge pull request #74 from biowdl/BIOWDL-78 · af4ccc1c
  Cats authored 6 years ago
  
  add SomaticSeq
  af4ccc1c
- Merge branch 'develop' into BIOWDL-78 · 8eda5fed
  Cats authored 6 years ago
  
  8eda5fed
Nov 23, 2018
- Setting version to 0.2-SNAPSHOT · 2b0c491d
  Ruben Vorderman authored 6 years ago
  
  2b0c491d
- Setting version to 0.1 · 5a4ddaa9
  Ruben Vorderman authored 6 years ago
  
  View commits for tag v0.1 v0.1
  
  5a4ddaa9
- replace developer · fac01b42
  Ruben Vorderman authored 6 years ago
  
  fac01b42
- scalafmt · e9ff0af3
  Ruben Vorderman authored 6 years ago
  
  e9ff0af3
- Merge branch 'develop' of https://github.com/biowdl/tasks into develop · 1d374ee9
  Ruben Vorderman authored 6 years ago
  
  1d374ee9
- sbt settings correct · 1150f801
  Ruben Vorderman authored 6 years ago
  
  1150f801
- add gitignore · d18ee26a
  Ruben Vorderman authored 6 years ago
  
  d18ee26a
- added build.sbt · ecac75c2
  Ruben Vorderman authored 6 years ago
  
  ecac75c2
- Merge pull request #75 from biowdl/BIOWDL-135 · 2d06d3ac
  Ruben Vorderman authored 6 years ago
  
  Add multiqc
  2d06d3ac
- Merge branch 'BIOWDL-135' of https://github.com/biowdl/tasks into BIOWDL-135 · 6bd11ab2
  Ruben Vorderman authored 6 years ago
  
  6bd11ab2
- remove optional · 3b11fd21
  Ruben Vorderman authored 6 years ago
  
  3b11fd21
- Merge branch 'develop' into BIOWDL-135 · 2ef4ffe8
  Ruben Vorderman authored 6 years ago
  
  2ef4ffe8
Nov 22, 2018
- fix non existing output · 734b5440
  Ruben Vorderman authored 6 years ago
  
  734b5440
- fix name · f4b8b478
  Ruben Vorderman authored 6 years ago
  
  f4b8b478
- fix filename · cb3db4e3
  Ruben Vorderman authored 6 years ago
  
  cb3db4e3
- add dependencies · 9ffedd27
  Ruben Vorderman authored 6 years ago
  
  9ffedd27
- fix select_first errors · 41e12e5f
  Ruben Vorderman authored 6 years ago
  
  41e12e5f
- adress review comments · afaebb33
  Cats authored 6 years ago
  
  afaebb33
- Merge branch 'develop' into BIOWDL-78 · 5b7e752f
  Cats authored 6 years ago
  
  5b7e752f
Nov 21, 2018
- work on outputs · b48b8367
  Ruben Vorderman authored 6 years ago
  
  b48b8367
- add multiqc task · b470abe9
  Ruben Vorderman authored 6 years ago
  
  b470abe9
- start on multiqc · a6ff5181
  Ruben Vorderman authored 6 years ago
  
  a6ff5181
Nov 15, 2018
- Merge pull request #73 from biowdl/BIOWDL-128 · dbee4846
  Ruben Vorderman authored 6 years ago
  
  Add gffread task
  dbee4846