Commits · 8591feb0815fd44472761359244c4ee6c6d45752 · biowdl / tasks

Aug 07, 2020
- Add pacbio bam2fastx tool. · 8591feb0
  JasperBoom authored 4 years ago
  
  8591feb0
Aug 06, 2020
- add missing category for outputType in bcftools view · d1922724
  Cats authored 4 years ago
  
  d1922724
Aug 05, 2020
- setting next version · 5d5a335a
  Cats authored 4 years ago
  
  5d5a335a
- set version in changelog to stable version · d1e2d6e5
  Cats authored 4 years ago
  
  View commits for tag v4.0.0 v4.0.0
  
  d1e2d6e5
- update scripts · 0ecfa670
  Cats authored 4 years ago
  
  0ecfa670
Jul 29, 2020
- Merge pull request #235 from biowdl/KG-549 · f2546aa7
  Ruben Vorderman authored 4 years ago
  
  Last tweaks before release
  f2546aa7
- update changelog · be890eb5
  Ruben Vorderman authored 4 years ago
  
  be890eb5
- Update default cutadapt image · ed49efcb
  Ruben Vorderman authored 4 years ago
  
  ed49efcb
Jul 28, 2020
- Set compression level to 1 and higher time estimate for mergevcf task · 6eb33c3d
  Ruben Vorderman authored 4 years ago
  
  6eb33c3d
Jul 23, 2020
- Merge pull request #233 from biowdl/bwasortthreads · bf2590ca
  Ruben Vorderman authored 4 years ago
  
  Increase the number of sorting threads to prevent pipe blocks in aligners.
  bf2590ca
Jul 22, 2020
- update changelog · 15c960d2
  Ruben Vorderman authored 4 years ago
  
  15c960d2
- correct memory selection · f6bf488f
  Ruben Vorderman authored 4 years ago
  
  f6bf488f
- Bring changes to hisat2 too · ccbb50c1
  Ruben Vorderman authored 4 years ago
  
  ccbb50c1
- Merge branch 'develop' into bwasortthreads · 34df25d9
  Ruben Vorderman authored 4 years ago
  
  34df25d9
- Merge pull request #232 from biowdl/BIOWDL-487 · 46f90dc3
  Jasper authored 4 years ago
  
  BIOWDL-487: Update output names for the first set of tasks.
  46f90dc3
- Update CHANGELOG. · fd4e8619
  JasperBoom authored 4 years ago
  
  fd4e8619
- Fix tests. · d8a159f3
  JasperBoom authored 4 years ago
  
  d8a159f3
- Update CHANGELOG. · 5010738c
  JasperBoom authored 4 years ago
  
  5010738c
- Fix tests. · fe7b8a1e
  JasperBoom authored 4 years ago
  
  fe7b8a1e
- Fix some input naming. · 5e572ffc
  JasperBoom authored 4 years ago
  
  5e572ffc
- Fix tests. · 7e8c833e
  JasperBoom authored 4 years ago
  
  7e8c833e
- Fix last set of tasks. · 4fbfe713
  JasperBoom authored 4 years ago
  
  4fbfe713
Jul 21, 2020
- Update output names for the first set of tasks. · c248c5bb
  JasperBoom authored 4 years ago
  
  c248c5bb
Jul 20, 2020
- Merge pull request #231 from biowdl/BIOWDL-484 · 795a285e
  Ruben Vorderman authored 4 years ago
  
  Update images
  795a285e
- Update changelog · 34163a93
  Ruben Vorderman authored 4 years ago
  
  34163a93
- Remove redundant newline. · 633c58b2
  Ruben Vorderman authored 4 years ago
  
  Co-authored-by: Jasper <jboom@infernum.nl>
  633c58b2
- Add missing interpunction. · 9826e25a
  Ruben Vorderman authored 4 years ago
  
  Co-authored-by: Jasper <jboom@infernum.nl>
  9826e25a
Jul 17, 2020
- update changelog · 156e9cc4
  Ruben Vorderman authored 4 years ago
  
  156e9cc4
- Merge branch 'BIOWDL-484' of https://github.com/biowdl/tasks into BIOWDL-484 · 33f50aaf
  Ruben Vorderman authored 4 years ago
  
  33f50aaf
- Update images · fdf0e47f
  Ruben Vorderman authored 4 years ago
  
  fdf0e47f
- Merge branch 'BIOWDL-484' of https://github.com/biowdl/tasks into BIOWDL-484 · 22eef833
  Ruben Vorderman authored 4 years ago
  
  22eef833
- Update parameter_meta · 9c8b72b8
  Ruben Vorderman authored 4 years ago
  
  9c8b72b8
- Update task with newest features · 4b065c35
  Ruben Vorderman authored 4 years ago
  
  4b065c35
- Update default gatk image · 959bf985
  Ruben Vorderman authored 4 years ago
  
  959bf985
- fix view task · 631b5dfa
  Ruben Vorderman authored 4 years ago
  
  631b5dfa
- Overhaul view task · 86cd2038
  Ruben Vorderman authored 4 years ago
  
  86cd2038
- update docker image · 77b3d960
  Ruben Vorderman authored 4 years ago
  
  77b3d960
- update default images · 1308c181
  Ruben Vorderman authored 4 years ago
  
  1308c181
Jul 16, 2020
- Update picard container · 8845e4f5
  Ruben Vorderman authored 4 years ago
  
  8845e4f5
- update samtools image · 3e254fea
  Ruben Vorderman authored 4 years ago
  
  3e254fea