Commits · 4fbfe713091934c380df0f1b565428fe520af638 · biowdl / tasks

Jul 22, 2020
- Fix last set of tasks. · 4fbfe713
  JasperBoom authored 4 years ago
  
  4fbfe713
May 11, 2020
- time_minutes · 6b8a7551
  Cats authored 4 years ago
  
  6b8a7551
Mar 12, 2020
- Rewrite command syntax. · 73b04864
  JasperBoom authored 5 years ago
  
  73b04864
Jan 29, 2020
- Update parameter_meta and fix centrifuge index locating. · 2105f016
  JasperBoom authored 5 years ago
  
  2105f016
Jan 15, 2020
- update parameter_meta of minimap2, talon and transcriptclean · a78426b8
  Cats authored 5 years ago
  
  a78426b8
Dec 10, 2019
- fix SC2046 · 86182571
  Cats authored 5 years ago
  
  86182571
Nov 07, 2019
- Fixed travis failure. · 07bac37b
  JB authored 5 years ago
  
  07bac37b
- Addressed PR comments. · e1401cec
  JB authored 5 years ago
  
  e1401cec
Nov 06, 2019
- Fix womtools validate warnings. · 04a4f7d5
  JB authored 5 years ago
  
  04a4f7d5
- Update parameter_meta sections for Minimap2 and TranscriptClean. · 34b221f2
  JB authored 5 years ago
  
  34b221f2
Oct 02, 2019
- memory Int -> String part 2 · 1a455271
  Cats authored 5 years ago
  
  1a455271
Sep 26, 2019

Boom authored 5 years ago

Based on minimap2 recommendations, the -k tag should be set to 14 for aligning directRNA Nanopore data

cb929160

Sep 24, 2019
- Add the option for --MD tag to minimap2 · ca019697
  JB authored 5 years ago
  
  ca019697
Sep 06, 2019
- Reset set -e · 72ebdbc7
  JB authored 5 years ago
  
  72ebdbc7
- Removed "pipefail" from command sections and altered "secondaryAlignment" Boolean · 5596c3da
  JB authored 5 years ago
  
  5596c3da
- Fixed indentation in command sections · 102bff10
  JB authored 5 years ago
  
  102bff10
- Add WDL task for Minimap2 · e935658a
  JB authored 5 years ago
  
  e935658a