Commits · 4b065c35ce49b561dc2aa1a4118f01e31a8bdfe4 · biowdl / tasks

Jul 17, 2020
- Update task with newest features · 4b065c35
  Ruben Vorderman authored 4 years ago
  
  4b065c35
Jul 13, 2020
- Request less memory for htseq-count · 5e122542
  Ruben Vorderman authored 4 years ago
  
  5e122542
Apr 09, 2020
- update time_minutes · a4b3d7a9
  Cats authored 5 years ago
  
  a4b3d7a9
Apr 08, 2020
- even more time_minutes · 605bba8d
  Cats authored 5 years ago
  
  605bba8d
Feb 11, 2020
- add license headers · 407435d8
  Ruben Vorderman authored 5 years ago
  
  407435d8
Jan 06, 2020
- update htseq version · a976eacf
  Cats authored 5 years ago
  
  a976eacf
Dec 10, 2019
- fix SC2046 · 86182571
  Cats authored 5 years ago
  
  86182571
Oct 31, 2019
- add parameter_meta to fastqc · 2fe5710c
  Cats authored 5 years ago
  
  2fe5710c
Oct 30, 2019
- fix htseq parameter_meta · 1034cd0f
  Cats authored 5 years ago
  
  1034cd0f
Oct 02, 2019
- memory Int -> String part 2 · 1a455271
  Cats authored 5 years ago
  
  1a455271
Sep 11, 2019
- support name based sorting in smallRNA pipeline · 33f53d10
  Mei authored 5 years ago
  
  33f53d10
Sep 06, 2019
- add parameter_meta to tasks used in expression-quantification · 7e2a1599
  Cats authored 5 years ago
  
  7e2a1599
Jul 18, 2019
- fix additionalAttributes · 6d8c988a
  Ruben Vorderman authored 5 years ago
  
  6d8c988a
- add additional attributes · ef06f581
  Ruben Vorderman authored 5 years ago
  
  ef06f581
Jul 17, 2019
- add featureType · 2ae34717
  Ruben Vorderman authored 5 years ago
  
  2ae34717
Jun 27, 2019
- dockerimage htseq collect-collumns · adb969ec
  Ruben Vorderman authored 5 years ago
  
  adb969ec
Jun 18, 2019
- add default output tables · 40748f8f
  Ruben Vorderman authored 5 years ago
  
  40748f8f
Jun 12, 2019
- memory adjustments · b7e9ca35
  Cats authored 5 years ago
  
  b7e9ca35
Feb 22, 2019
- some clean up · 4da285de
  Cats authored 6 years ago
  
  4da285de
Feb 14, 2019
- add docker containers for htseq and stringtie, escape $ in mergecounts · 3f682360
  Cats authored 6 years ago
  
  3f682360
Dec 06, 2018
- more memory for htseq · b098f9d2
  Ruben Vorderman authored 6 years ago
  
  b098f9d2
- higher memory for htseqcount · 8899e8c4
  Ruben Vorderman authored 6 years ago
  
  8899e8c4
Sep 12, 2018
- Fixing validate issues · 9f02ca5a
  ffinfo authored 6 years ago
  
  9f02ca5a
Sep 10, 2018
- Added import · 88afc024
  ffinfo authored 6 years ago
  
  88afc024
- Switch to strucs · d557d942
  ffinfo authored 6 years ago
  
  d557d942
Jul 24, 2018
- turn optional with default into mandatory with default · 6425926f
  Cats authored 6 years ago
  
  6425926f
Jul 23, 2018
- macs2 and htseq.wdl to 1.0 · 1dbfac51
  Ruben Vorderman authored 6 years ago
  
  1dbfac51
May 22, 2018
- expression counting fixes · 67342e03
  Cats authored 6 years ago
  
  67342e03
Apr 05, 2018
- rename gff to gtf · e1a70e6e
  Cats authored 7 years ago
  
  e1a70e6e
Apr 04, 2018
- adjust memory · 75742e19
  Cats authored 7 years ago
  
  75742e19
Apr 03, 2018
- add runtime settings · 93240a92
  Cats authored 7 years ago
  
  93240a92
Mar 16, 2018
- make outputs write to files and prefix is a must · ee155ce8
  Cats authored 7 years ago
  
  ee155ce8
- Add quantification tools · 1c1a9554
  Cats authored 7 years ago
  
  1c1a9554