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biowdl
tasks
Commits
e7227075
Commit
e7227075
authored
3 years ago
by
Ruben Vorderman
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.github/workflows/lint.yml
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e7227075
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@@ -71,15 +71,19 @@ jobs:
womtool validate $WDL_FILE
done
-
name
:
run miniwdl check
run
:
bash -c 'miniwdl check $(git ls-files *.wdl)'
run
:
|
set -x
bash -c 'miniwdl check $(git ls-files *.wdl)'
-
name
:
Check copyright headers
run
:
|
set -x
for WDL_FILE in $(git diff --name-only origin/${{github.base_ref}} | grep -E '*.wdl$'); do
grep Copyright $WDL_FILE || bash -c "echo No copyright header in $WDL_FILE && exit 1"
done
-
name
:
Check parameter_meta for inputs
run
:
|
set -x
for WDL_FILE in $(git diff --name-only origin/${{github.base_ref}} | grep -E '*.wdl$'); do
wdl-aid --strict $WDL_FILE > /dev/null 2> wdl-aid_stderr ||
if grep -z 'ValueError: Missing parameter_meta for inputs:' wdl-aid_stderr
...
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