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Unverified Commit d81eed41 authored by Cats's avatar Cats Committed by GitHub
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Merge branch 'develop' into BIOWDL-51

parents c5832982 9081f0d7
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1 merge request!30add picard metrics tools
...@@ -5,6 +5,7 @@ task PeakCalling { ...@@ -5,6 +5,7 @@ task PeakCalling {
String sampleName String sampleName
Int? threads Int? threads
Int? memory Int? memory
Boolean? nomodel
command { command {
set -e -o pipefail set -e -o pipefail
...@@ -12,7 +13,8 @@ task PeakCalling { ...@@ -12,7 +13,8 @@ task PeakCalling {
macs2 callpeak \ macs2 callpeak \
--treatment ${sep = ' ' bamFiles} \ --treatment ${sep = ' ' bamFiles} \
--outdir ${outDir} \ --outdir ${outDir} \
--name ${sampleName} --name ${sampleName} \
${default=false true='--nomodel' false='' nomodel}
} }
output { output {
......
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