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d000fc3c

Commit d000fc3c authored 5 years ago by Cats

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Merge remote-tracking branch 'origin/develop' into bwakit

parents 14d4170e 690aedb5

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CHANGELOG.md 18 additions, 1 deletion

CHANGELOG.md
CPAT.wdl 1 addition, 1 deletion

CPAT.wdl
VERSION 1 addition, 1 deletion

VERSION
bedtools.wdl 6 additions, 7 deletions

bedtools.wdl
bioconda.wdl 0 additions, 30 deletions

bioconda.wdl
bwa.wdl 2 additions, 50 deletions

bwa.wdl
centrifuge.wdl 1 addition, 0 deletions

centrifuge.wdl
collect-columns.wdl 1 addition, 1 deletion

collect-columns.wdl
common.wdl 50 additions, 3 deletions

common.wdl
cutadapt.wdl 1 addition, 1 deletion

cutadapt.wdl
gatk.wdl 4 additions, 8 deletions

gatk.wdl
gffcompare.wdl 3 additions, 1 deletion

gffcompare.wdl
htseq.wdl 1 addition, 2 deletions

htseq.wdl
mergecounts.wdl 0 additions, 75 deletions

mergecounts.wdl
minimap2.wdl 3 additions, 0 deletions

minimap2.wdl
multiqc.wdl 4 additions, 2 deletions

multiqc.wdl
samtools.wdl 23 additions, 0 deletions

samtools.wdl
scripts 1 addition, 1 deletion

scripts
somaticseq.wdl 1 addition, 1 deletion

somaticseq.wdl
talon.wdl 1 addition, 1 deletion

talon.wdl

with 122 additions and 186 deletions

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