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Unverified Commit b3d1cd6c authored by Ruben Vorderman's avatar Ruben Vorderman Committed by GitHub
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Merge pull request #56 from biowdl/BIOWDL-88 

Switch bwa index to struct
parents eab20e8c a7f9e367
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......@@ -92,8 +92,10 @@ task Index {
}
output {
File indexedFasta = outputFile
Array[File] indexFiles = [outputFile + ".bwt",outputFile + ".pac",outputFile + ".sa",outputFile + ".amb",outputFile + ".ann"]
BwaIndex outputIndex = {
"fastaFile": outputFile,
"indexFiles": [outputFile + ".bwt",outputFile + ".pac",outputFile + ".sa",outputFile + ".amb",outputFile + ".ann"]
}
}
parameter_meta {
......
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