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8fccf548

Unverified Commit 8fccf548 authored 6 years ago by Ruben Vorderman Committed by GitHub 6 years ago

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Merge pull request #36 from biowdl/reduceComplexity

Make optional values mandatory where appropriate

parents f3b6fa09 6425926f

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Changes 19

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bioconda.wdl 2 additions, 2 deletions

bioconda.wdl
biopet.wdl 70 additions, 88 deletions

biopet.wdl
bwa.wdl 10 additions, 7 deletions

bwa.wdl
centrifuge.wdl 32 additions, 30 deletions

centrifuge.wdl
common.wdl 2 additions, 2 deletions

common.wdl
cutadapt.wdl 35 additions, 22 deletions

cutadapt.wdl
fastqc.wdl 6 additions, 6 deletions

fastqc.wdl
flash.wdl 8 additions, 8 deletions

flash.wdl
gatk.wdl 75 additions, 87 deletions

gatk.wdl
htseq.wdl 8 additions, 8 deletions

htseq.wdl
macs2.wdl 6 additions, 6 deletions

macs2.wdl
ncbi.wdl 17 additions, 11 deletions

ncbi.wdl
picard.wdl 70 additions, 85 deletions

picard.wdl
samtools.wdl 14 additions, 13 deletions

samtools.wdl
seqtk.wdl 9 additions, 8 deletions

seqtk.wdl
spades.wdl 23 additions, 26 deletions

spades.wdl
star.wdl 12 additions, 15 deletions

star.wdl
stringtie.wdl 2 additions, 2 deletions

stringtie.wdl
unicycler.wdl 5 additions, 5 deletions

unicycler.wdl

with 406 additions and 431 deletions

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