Update smoove.wdl

Co-Authored-By: DavyCats <davycats.dc@gmail.com>

Update smoove.wdl
8f1d98a4 · Cedrick Agaser · GitHub · c8d443ae · 8f1d98a4
Unverified Commit 8f1d98a4 authored 5 years ago by Cedrick Agaser Committed by GitHub 5 years ago
--- a/smoove.wdl
+++ b/smoove.wdl
@@ -38,7 +38,7 @@ task Call {

    command {
        set -e
-        mkdir -p "$(dirname ~{outputDir})"
+        mkdir -p ~{outputDir}
        smoove call \
        --outdir ~{outputDir} \
        --name ~{sample} \