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biowdl
tasks
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66942862
Commit
66942862
authored
2 years ago
by
Cats
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update changelog
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2761d302
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CHANGELOG.md
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@@ -9,6 +9,14 @@ that users understand how the changes affect the new version.
-->
version 5.1.0-dev
---------------------------
+
Increased the timeMinutes runtime attribute for manta (somatic and germline) to
`2880`
.
+
Add a task for GRIDSS somatic filtering.
+
Add a task to generate a panel of normals BED and BEDPE file for GRIDSS.
+
Add a task to filter a GRIDSS PON.
+
Add a task for delly somatic filtering.
+
Delly CallSV's
`bamFile`
and
`bamIndex`
inputs are not arrays of files, allowing
for multiple samples to be included.
+
Add
`samples`
input to bcftools view to select samples included in the output vcf.
+
Add a separatorChar input to the tagUmi task.
+
Bug fix: Add space between flag and the value provided for macs2
+
Add optional inputs to macs2, aiming to allow adhering to Encode ATACs-seq. Inputs added:
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