remove tabix from gridss

3c92beac · Cats · f169d785 · 3c92beac
Commit 3c92beac authored 3 years ago by Cats
--- a/gridss.wdl
+++ b/gridss.wdl
@@ -112,7 +112,6 @@ task GRIDSS {
        ~{"--blacklist " + blacklistBed} \
        ~{normalBam} \
        ~{tumorBam}
-        tabix -p vcf ~{outputPrefix}.vcf.gz
        samtools index ~{outputPrefix}_assembly.bam ~{outputPrefix}_assembly.bai
    }