use files not string

1dcdf24a · Ruben Vorderman · 9c2b7953 · 1dcdf24a
Commit 1dcdf24a authored 6 years ago by Ruben Vorderman
--- a/CPAT.wdl
+++ b/CPAT.wdl
@@ -5,8 +5,8 @@ task CPAT {
        String? preCommand
        File gene
        String outFilePath
-        String hex
-        String logitModel
+        File hex
+        File logitModel
        File? referenceGenome
        File? referenceGenomeIndex  # Should be added as input if
        # CPAT should not index the reference genome.