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Commit 070cbb25 authored by Cats's avatar Cats
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add missing input

parent 8bc34ddf
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......@@ -25,6 +25,7 @@ version 1.0
task Annotate {
input {
File? annsFile
File? annsFileIndex
String? collapse
Array[String] columns = []
String? exclude
......@@ -99,7 +100,8 @@ task Annotate {
parameter_meta {
outputPath: {description: "The location the output VCF file should be written.", category: "common"}
outputType: {description: "Output type: v=vcf, z=vcf.gz, b=bcf, u=uncompressed bcf", category: "advanced"}
annsFile: {description: "Bgzip-compressed and tabix-indexed file with annotations (see man page for details).", category: "advanced"}
annsFile: {description: "Bgzip-compressed and tabix-indexed file with annotations (see man page for details).", category: "common"}
annsFileIndex: {description: "The index for annsFile.", category: "common"}
collapse: {description: "Treat as identical records with <snps|indels|both|all|some|none>, see man page for details.", category: "advanced"}
columns: {description: "Comma-separated list of columns or tags to carry over from the annotation file (see man page for details).", category: "advanced"}
exclude: {description: "Exclude sites for which the expression is true (see man page for details).", category: "advanced"}
......
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