home.md

@@ -9,17 +9,17 @@ Shark cluster runs with [Open Grid Scheduler/Grid Engine](http://gridscheduler.s
 ## Introduction and interesting starting points
 The following links contain the minimal information you need to get started on the shark cluster. When using the cluster you acknowledge that you have read and understand the following articles.
 
- * [Guidelines] -- what you can and can't do on this cluster
+ * [Guidelines](Guidelines) -- what you can and can't do on this cluster
  * [function of the Shark cluster](Primairy) -- Primary usage Shark cluster
  * [network shares](Network_shares) -- where to put your data
- * [Queues] -- which queue is for what
+ * [Queues](Queues) -- which queue is for what
  * [Batch queuing commands](qsubCommands) -- explanation of the qsub command
- * [Examples] -- examples how to qsub your jobs
- * [Makefile] -- Howto use qmake with a Makefile
+ * [Examples](Examples) -- examples how to qsub your jobs
+ * [Makefile](Makefile) -- Howto use qmake with a Makefile
  * [SGE state symbol codes](StateCode) -- Sun Grid Engine SGE state letter symbol codes meanings
- * [FAQ] -- Frequently asked questions and answers
- * [Presentations] -- Interesting presentations
- * [testsets] -- Featured test data
+ * [FAQ](FAQ) -- Frequently asked questions and answers
+ * [Presentations](Presentations) -- Interesting presentations
+ * [testsets](testsets)-- Featured test data
  * [Using the checkpointing queue](CheckpointingQueue) -- how/when to use the checkpointing queue
 ----
 ## The new SHARK cluster in the resource/research network
@@ -57,17 +57,18 @@ The following links contain the minimal information you need to get started on t
  * [Ganglia Shark cluster monitor](http://shark.lumcnet.prod.intern/ganglia/?c=Shark%20Cluster&m=load_one&r=hour&s=descending&hc=4&mc=2) -- view the load, disk space etc. on the Shark cluster
  * [Grid Engine HOWTOs](http://arc.liv.ac.uk/SGE/howto/).
  * [SVN repository (for course material and example scripts).](https://humgenprojects.lumc.nl/svn/shark/)
+
 ## Usage Statistics
  * [Shark Usage 2012](http://shark.lumcnet.prod.intern/stats/SharkStats2012.html)
  * [Projects from LGTC people that need cleanup](ProjectsCleanup)
+
 ## Usefull Links
  * [Wiki gridengine](http://wiki.gridengine.info/wiki/index.php/Main_Page)
  * [This is an archive of Stephan Grell's blog posts.](http://wiki.gridengine.info/wiki/index.php/StephansBlog)
  * [DanT's Grid Blog, Sun Grid Engine for dummies](https://blogs.oracle.com/templedf/entry/sun_grid_engine_for_dummies)
  * [sge_intro(1) - Linux man page](http://linux.die.net/man/1/sge_intro)
+
 ## Documentation
  * Setup and install the [Shark](Shark_setup) head node with Ubuntu 10.04.04 LTS and Open Grid Scheduler
  * Setup [LDAP/Kerberos authentication](Ubuntu) within a Microsoft Windows 2008 Domain
  * Open Grid Scheduler [FineTune and solutions](FineTune/Solutions)
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-For a complete list of local wiki pages, see TitleIndex.
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