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## Environment Modules
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* All environmens on the new Shark are controlled with environment modules.
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* The default modules that are loaded are OpenGridScheduler and History.
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* Modules can be loaded, unloaded and switched.
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* Multiple modules can be loaded, Your $PATH will be adjusted and the latest module will have it's path as first path in your PATH environment!
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To view the loaded modules use;
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#!sh
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$ module list
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Currently Loaded Modulefiles:
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1) OpenGridScheduler 2) History
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To view the modules available:
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#!sh
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$ module avail
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------------------------------------------------------------------------------------ /usr/local/Modules/versions -------------------------------------------------------------------------------------
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3.2.10
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------------------------------------------------------------------------------- /usr/local/Modules/3.2.10/modulefiles --------------------------------------------------------------------------------
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dot java/Oracle-JRE-1.7 module-info OpenGridScheduler python/3.4.1 R/3.0.2
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History java/Oracle-JRE-1.8 modules PacificBiosciences/rDnaTools qiime R/3.1.1
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java/openjdk-7 module-git null PacificBiosciences/smrtanalysis R/2.15.3 use.own
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}}}
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To load a module:
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#!sh
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$ module load R/3.1.1
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To switch a module from R3.1.1 to R3.0.2 use:
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#!sh
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$ module switch R/3.1.1 R/3.0.2
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To unload a module:
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#!sh
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$ module unload R/3.0.2
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