NGS Introduction Course

This repository contains lectures and practicals for a one day introduction to NGS data analysis.

Organisation

There are two submodules on which this repository depends.

• presentation template for presentations in LaTeX.
• presentation-pics repository containing pictures.

The website directory is for storing the compiled presentations, handouts and program. A Trac wiki markup file contains the website content. Uploading, updating and adding attachments can be done easily with the tracwiki program.

Usage

After cloning this repository, fetch the data from the submodules by issuing the following two commands:

git submodule init
git submodule update

(More on Git submodules)

A new presentation can be added like this:

cd presentation
bash mkpres.sh ../mypresentation

Pictures in the presentation can be made available by adding a symbolic link to the presentation-pics repository.

ln -s ../presentation-pics/pics/somepicture.png

The Makefile will take care of converting this picture to the correct format.