Skip to content
GitLab
Explore
Sign in
biowdl
tasks
Merge requests
Open
0
Merged
97
Closed
3
All
100
Actions
Subscribe to RSS feed
Recent searches
{{formattedKey}}
{{ title }}
{{ help }}
{{name}}
@{{username}}
None
Any
{{name}}
@{{username}}
None
Any
{{name}}
@{{username}}
None
Any
{{name}}
@{{username}}
None
Any
Upcoming
Started
{{title}}
None
Any
{{title}}
None
Any
{{title}}
None
Any
{{name}}
Yes
No
Yes
No
{{title}}
{{title}}
{{title}}
Title
Adapt sane defaults for human analysis.
!82
· created
Dec 06, 2018
by
Ruben Vorderman
develop
Merged
0
updated
Dec 07, 2018
Add argument for filtering on MAPQ (alignment quality) for View task
!80
· created
Dec 04, 2018
by
Ruben Vorderman
develop
Merged
0
updated
Dec 05, 2018
add bamFile input to scatterregions
!100
· created
Mar 18, 2019
by
Ruben Vorderman
develop
Merged
0
updated
Mar 19, 2019
Add bamstats
!62
· created
Sep 12, 2018
by
Ruben Vorderman
develop
Merged
1
updated
Sep 12, 2018
add BedTOIntervalList
!55
· created
Aug 23, 2018
by
Ruben Vorderman
develop
Merged
0
updated
Aug 23, 2018
Add copy
!99
· created
Mar 12, 2019
by
Ruben Vorderman
develop
Merged
0
updated
Mar 13, 2019
Add CPAT
!72
· created
Nov 13, 2018
by
Ruben Vorderman
develop
Merged
4
updated
Nov 13, 2018
add docker for extract adapters, catadapt and fastqc
!88
· created
Feb 08, 2019
by
Ruben Vorderman
develop
Merged
0
updated
Feb 11, 2019
Add docker for samtools and STAR
!86
· created
Feb 01, 2019
by
Ruben Vorderman
develop
Merged
0
updated
Feb 01, 2019
Add gffcompare
!71
· created
Nov 12, 2018
by
Ruben Vorderman
develop
Merged
0
updated
Nov 12, 2018
Add gffread task
!73
· created
Nov 15, 2018
by
Ruben Vorderman
develop
Merged
1
updated
Nov 15, 2018
add hisat2 task
!91
· created
Feb 20, 2019
by
Ruben Vorderman
develop
Merged
0
updated
Feb 20, 2019
add intervals option to SplitNCigarReads
!7
· created
Mar 21, 2018
by
Ruben Vorderman
Merged
0
updated
Mar 29, 2018
add limitBAMsortRAM to STAR and make sampleConfig write to file
!14
· created
May 14, 2018
by
Ruben Vorderman
Merged
5
updated
Jun 01, 2018
Add memory runtime for validate fastq
!23
· created
Jun 20, 2018
by
Ruben Vorderman
develop
Merged
0
updated
Jun 20, 2018
add merge counts
!6
· created
Mar 19, 2018
by
Ruben Vorderman
Merged
3
updated
Mar 29, 2018
Add missing rquired inputs
!35
· created
Jul 23, 2018
by
Ruben Vorderman
develop
Merged
0
updated
Jul 24, 2018
Add multiqc
!75
· created
Nov 23, 2018
by
Ruben Vorderman
develop
Merged
11
updated
Nov 23, 2018
add output to VcfStats
!49
· created
Aug 20, 2018
by
Ruben Vorderman
develop
Merged
1
updated
Aug 20, 2018
add outSAMunmapped to star
!81
· created
Dec 06, 2018
by
Ruben Vorderman
develop
Merged
0
updated
Feb 08, 2019
Prev
1
2
3
4
5
Next