Merge requests · biowdl / tasks

Add Various new tasks 4 of 4 checklist items completed

!40 · created Jul 27, 2018 by Ruben Vorderman develop
- MERGED
- 2
updated Jul 31, 2018
Macs2

!39 · created Jul 26, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Jul 26, 2018
Macs2

!38 · created Jul 26, 2018 by Ruben Vorderman develop
- CLOSED
- 0
updated Jul 26, 2018
Add samplesheet structs

!37 · created Jul 25, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Aug 22, 2018
Make optional values mandatory where appropriate

!36 · created Jul 24, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Jul 26, 2018
Add missing rquired inputs

!35 · created Jul 23, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Jul 24, 2018
Move all files to version 1.0

!34 · created Jul 23, 2018 by Ruben Vorderman develop
- MERGED
- 4
updated Jul 23, 2018
fix missing space after toolcommand

!33 · created Jul 23, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Jul 23, 2018
add validatevcf and validateannotation

!31 · created Jul 18, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Jul 19, 2018
style changes and adds task to check file md5

!32 · created Jul 19, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Jul 26, 2018
add picard metrics tools

!30 · created Jul 17, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Jul 19, 2018
Macs2

!29 · created Jul 16, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Jul 16, 2018
Added precommand to ExtractAdaptersFastqc task

!28 · created Jul 11, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Jul 11, 2018
Fix typo in command

!27 · created Jul 03, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Jul 03, 2018
Macs2

!26 · created Jul 02, 2018 by Ruben Vorderman develop
- MERGED
- 2
updated Jul 02, 2018
Biowdl 25

!15 · created May 29, 2018 by Ruben Vorderman
- MERGED
- 10
updated May 30, 2018
Added mkdir step

!25 · created Jun 28, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Jun 28, 2018
Added seqstat, set minlength for cutadapt to 1.

!21 · created Jun 14, 2018 by Ruben Vorderman develop
- MERGED
- 5
updated Jun 19, 2018
modify definition of defaults in star.wdl

!3 · created Mar 15, 2018 by Ruben Vorderman
- MERGED
- 0
updated Mar 16, 2018
Centrifuge related changes

!16 · created Jun 05, 2018 by Ruben Vorderman
- MERGED
- 0
updated Jun 12, 2018