Merge requests · biowdl / tasks

Add argument for filtering on MAPQ (alignment quality) for View task

!80 · created Dec 04, 2018 by Ruben Vorderman develop
- Merged
updated Dec 05, 2018
Run time settings and additional adjustments

!8 · created Apr 05, 2018 by Ruben Vorderman
- Merged
updated Apr 17, 2018
Update stringtie.wdl

!79 · created Dec 04, 2018 by Ruben Vorderman develop
- Merged
updated Dec 06, 2018
Macs2 biocontainer

!78 · created Nov 29, 2018 by Ruben Vorderman develop
- Merged
updated Dec 03, 2018
update docs to V0.1

!76 · created Nov 26, 2018 by Ruben Vorderman gh-pages
- Merged
updated Nov 26, 2018
add intervals option to SplitNCigarReads

!7 · created Mar 21, 2018 by Ruben Vorderman
- Merged
updated Mar 29, 2018
increase memory on bamstats

!69 · created Oct 25, 2018 by Ruben Vorderman develop
- Merged
updated Oct 25, 2018
Add bamstats

!62 · created Sep 12, 2018 by Ruben Vorderman develop
- Merged
- 1
updated Sep 12, 2018
add merge counts

!6 · created Mar 19, 2018 by Ruben Vorderman
- Merged
- 3
updated Mar 29, 2018
Switch bwa index to struct

!56 · created Aug 29, 2018 by Ruben Vorderman develop
- Merged
- 1
updated Aug 29, 2018
Added alt post script

!54 · created Aug 23, 2018 by Ruben Vorderman develop
- Merged
- 2
updated Aug 28, 2018
Fixing outputs

!51 · created Aug 21, 2018 by Ruben Vorderman develop
- Merged
updated Aug 21, 2018
Added sctruct for index files

!50 · created Aug 20, 2018 by Ruben Vorderman develop
- Merged
updated Aug 21, 2018
add SplitNCigarReads

!5 · created Mar 19, 2018 by Ruben Vorderman
- Merged
- 1
updated Mar 20, 2018
add output to VcfStats

!49 · created Aug 20, 2018 by Ruben Vorderman develop
- Merged
- 1
updated Aug 20, 2018
Added Cromwell array tool

!48 · created Aug 20, 2018 by Ruben Vorderman develop
- Merged
- 2
updated Aug 20, 2018
typo

!42 · created Jul 27, 2018 by Ruben Vorderman develop
- Merged
updated Jul 27, 2018
fix type of R2_md5 (String to String?)

!41 · created Jul 27, 2018 by Ruben Vorderman develop
- Merged
- 1
updated Jul 27, 2018
Add quantification tools

!4 · created Mar 16, 2018 by Ruben Vorderman
- Merged
- 4
updated Mar 29, 2018
Add samplesheet structs

!37 · created Jul 25, 2018 by Ruben Vorderman develop
- Merged
updated Aug 22, 2018