... | @@ -1029,6 +1029,8 @@ You can see from the output that we have **3 GPU's: Cuda devices: 0,1,2** |
... | @@ -1029,6 +1029,8 @@ You can see from the output that we have **3 GPU's: Cuda devices: 0,1,2** |
|
|
|
|
|
#### Compiling and running GPU programs
|
|
#### Compiling and running GPU programs
|
|
|
|
|
|
|
|
First download and compile the samples from NVidia:
|
|
|
|
|
|
```
|
|
```
|
|
module purge
|
|
module purge
|
|
module add library/cuda/10.1/gcc.8.3.1
|
|
module add library/cuda/10.1/gcc.8.3.1
|
... | @@ -1037,7 +1039,11 @@ cd |
... | @@ -1037,7 +1039,11 @@ cd |
|
git clone https://github.com/NVIDIA/cuda-samples.git
|
|
git clone https://github.com/NVIDIA/cuda-samples.git
|
|
cd cuda-samples/Samples/UnifiedMemoryPerf/
|
|
cd cuda-samples/Samples/UnifiedMemoryPerf/
|
|
make
|
|
make
|
|
|
|
```
|
|
|
|
|
|
|
|
Create a slurm batch script:
|
|
|
|
|
|
|
|
```
|
|
cat gpu-test.slurm
|
|
cat gpu-test.slurm
|
|
#!/bin/bash
|
|
#!/bin/bash
|
|
#
|
|
#
|
... | @@ -1053,8 +1059,13 @@ module add library/cuda/10.2/gcc.8.3.1 |
... | @@ -1053,8 +1059,13 @@ module add library/cuda/10.2/gcc.8.3.1 |
|
hostname
|
|
hostname
|
|
echo "Cuda devices: $CUDA_VISIBLE_DEVICES"
|
|
echo "Cuda devices: $CUDA_VISIBLE_DEVICES"
|
|
$HOME/cuda-samples/Samples/UnifiedMemoryPerf/UnifiedMemoryPerf
|
|
$HOME/cuda-samples/Samples/UnifiedMemoryPerf/UnifiedMemoryPerf
|
|
|
|
```
|
|
|
|
* sbatch gpu-test.slurm
|
|
|
|
|
|
|
|
While running, ssh to the node (in this case res-hpc-gpu01) and run the command **nvidia-smi**.
|
|
|
|
This will show that the "UnifiedMemoryPerf" program is running on a GPU.
|
|
|
|
|
|
|
|
```
|
|
[user@res-hpc-gpu01 GPU]$ nvidia-smi
|
|
[user@res-hpc-gpu01 GPU]$ nvidia-smi
|
|
Tue Apr 14 16:06:06 2020
|
|
Tue Apr 14 16:06:06 2020
|
|
+-----------------------------------------------------------------------------+
|
|
+-----------------------------------------------------------------------------+
|
... | @@ -1079,8 +1090,11 @@ Tue Apr 14 16:06:06 2020 |
... | @@ -1079,8 +1090,11 @@ Tue Apr 14 16:06:06 2020 |
|
|=============================================================================|
|
|
|=============================================================================|
|
|
| 1 29726 C ...les/UnifiedMemoryPerf/UnifiedMemoryPerf 145MiB |
|
|
| 1 29726 C ...les/UnifiedMemoryPerf/UnifiedMemoryPerf 145MiB |
|
|
+-----------------------------------------------------------------------------+
|
|
+-----------------------------------------------------------------------------+
|
|
|
|
```
|
|
|
|
|
|
|
|
Output:
|
|
|
|
|
|
|
|
```
|
|
cat slurm-206625.out
|
|
cat slurm-206625.out
|
|
res-hpc-gpu01.researchlumc.nl
|
|
res-hpc-gpu01.researchlumc.nl
|
|
Cuda devices: 0
|
|
Cuda devices: 0
|
... | | ... | |