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Jan 23, 2020
by
van Vliet
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@@ -394,6 +394,7 @@ The following commands are useful:
-
sinfo
-
sinfo -a
-
sinfo -l
-
sinfo -N -l
```
[user@res-hpc-lo01 ~]$ sinfo
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@@ -415,6 +416,15 @@ gpu up infinite 1-infinite no NO all 1 idl
```
```
[user@res-hpc-lo01 ~]$ sinfo -N -l
Thu Jan 23 12:20:46 2020
NODELIST NODES PARTITION STATE CPUS S:C:T MEMORY TMP_DISK WEIGHT AVAIL_FE REASON
res-hpc-exe013 1 all* idle 16 2:8:1 128800 0 1 (null) none
res-hpc-exe014 1 all* idle 24 2:12:1 386800 0 1 (null) none
res-hpc-gpu01 1 gpu idle 48 2:24:1 515000 0 1 (null) none
```
If there are jobs running, you can see the following output:
```
[user@res-hpc-lo01 mpi-benchmarks]$ sinfo
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@@ -577,6 +587,60 @@ salloc: Relinquishing job allocation 267
[user@res-hpc-lo01 ~]$
```
In the example above, we won't run a command so we ended up in the bash environment.
With
**exit**
we leave the environment and we release the node.
```
[user@res-hpc-lo01 ~]$ salloc -N1 mpirun ./hello1
salloc: Granted job allocation 268
salloc: Waiting for resource configuration
salloc: Nodes res-hpc-exe013 are ready for job
Hello world from process 000 out of 001, processor name res-hpc-exe013.researchlumc.nl
salloc: Relinquishing job allocation 268
salloc: Job allocation 268 has been revoked.
```
Here we allocated 1 node with one core and ran the openmpi compiled "hello1" program.
Now the same with 2 nodes, 16 cores on each machine:
```
[user@res-hpc-lo01 ~]$ salloc -N2 --ntasks-per-node=16 mpirun ./hello1
salloc: Granted job allocation 270
salloc: Waiting for resource configuration
salloc: Nodes res-hpc-exe[013-014] are ready for job
Hello world from process 003 out of 032, processor name res-hpc-exe013.researchlumc.nl
Hello world from process 021 out of 032, processor name res-hpc-exe014.researchlumc.nl
Hello world from process 004 out of 032, processor name res-hpc-exe013.researchlumc.nl
Hello world from process 005 out of 032, processor name res-hpc-exe013.researchlumc.nl
Hello world from process 027 out of 032, processor name res-hpc-exe014.researchlumc.nl
Hello world from process 000 out of 032, processor name res-hpc-exe013.researchlumc.nl
Hello world from process 029 out of 032, processor name res-hpc-exe014.researchlumc.nl
Hello world from process 006 out of 032, processor name res-hpc-exe013.researchlumc.nl
Hello world from process 031 out of 032, processor name res-hpc-exe014.researchlumc.nl
Hello world from process 007 out of 032, processor name res-hpc-exe013.researchlumc.nl
Hello world from process 016 out of 032, processor name res-hpc-exe014.researchlumc.nl
Hello world from process 010 out of 032, processor name res-hpc-exe013.researchlumc.nl
Hello world from process 019 out of 032, processor name res-hpc-exe014.researchlumc.nl
Hello world from process 011 out of 032, processor name res-hpc-exe013.researchlumc.nl
Hello world from process 030 out of 032, processor name res-hpc-exe014.researchlumc.nl
Hello world from process 012 out of 032, processor name res-hpc-exe013.researchlumc.nl
Hello world from process 017 out of 032, processor name res-hpc-exe014.researchlumc.nl
Hello world from process 013 out of 032, processor name res-hpc-exe013.researchlumc.nl
Hello world from process 018 out of 032, processor name res-hpc-exe014.researchlumc.nl
Hello world from process 014 out of 032, processor name res-hpc-exe013.researchlumc.nl
Hello world from process 020 out of 032, processor name res-hpc-exe014.researchlumc.nl
Hello world from process 015 out of 032, processor name res-hpc-exe013.researchlumc.nl
Hello world from process 022 out of 032, processor name res-hpc-exe014.researchlumc.nl
Hello world from process 001 out of 032, processor name res-hpc-exe013.researchlumc.nl
Hello world from process 023 out of 032, processor name res-hpc-exe014.researchlumc.nl
Hello world from process 024 out of 032, processor name res-hpc-exe014.researchlumc.nl
Hello world from process 002 out of 032, processor name res-hpc-exe013.researchlumc.nl
Hello world from process 025 out of 032, processor name res-hpc-exe014.researchlumc.nl
Hello world from process 008 out of 032, processor name res-hpc-exe013.researchlumc.nl
Hello world from process 026 out of 032, processor name res-hpc-exe014.researchlumc.nl
Hello world from process 028 out of 032, processor name res-hpc-exe014.researchlumc.nl
Hello world from process 009 out of 032, processor name res-hpc-exe013.researchlumc.nl
salloc: Relinquishing job allocation 270
```
### Submitting jobs
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