Update home authored by van Vliet's avatar van Vliet
......@@ -1991,3 +1991,80 @@ Bioconda is a channel for the conda package manager specializing in bioinformati
| Detailed information about package versions | conda search PKGNAME --info |
| Remove a package from an environment | conda uninstall PKGNAME --name ENVNAME |
| Add a channel to your Conda configuration | conda config --add channels CHANNELNAME |
##### Example
```
module purge
module add tools/miniconda/python3.7/4.7.12
conda info
active environment : None
shell level : 0
user config file : /home/username/.condarc
populated config files : /home/username/.condarc
conda version : 4.7.12
conda-build version : not installed
python version : 3.7.4.final.0
virtual packages :
base environment : /share/software/tools/miniconda/3.7/4.7.12 (read only)
channel URLs : https://repo.anaconda.com/pkgs/main/linux-64
https://repo.anaconda.com/pkgs/main/noarch
https://repo.anaconda.com/pkgs/r/linux-64
https://repo.anaconda.com/pkgs/r/noarch
package cache : /share/software/tools/miniconda/3.7/4.7.12/pkgs
/home/username/.conda/pkgs
envs directories : /home/username/.conda/envs
/share/software/tools/miniconda/3.7/4.7.12/envs
platform : linux-64
user-agent : conda/4.7.12 requests/2.22.0 CPython/3.7.4 Linux/4.18.0-147.8.1.el8_1.x86_64 centos/8.1.1911 glibc/2.28
UID:GID : 225812:513
netrc file : None
offline mode : False
```
```
conda create --name Project-B
Collecting package metadata (current_repodata.json): done
Solving environment: done
## Package Plan ##
environment location: /home/username/.conda/envs/Project-B
Proceed ([y]/n)? y
Preparing transaction: done
Verifying transaction: done
Executing transaction: done
#
# To activate this environment, use
#
# $ conda activate Project-B
#
# To deactivate an active environment, use
#
# $ conda deactivate
```
```
conda init bash
no change /share/software/tools/miniconda/3.7/4.7.12/condabin/conda
no change /share/software/tools/miniconda/3.7/4.7.12/bin/conda
no change /share/software/tools/miniconda/3.7/4.7.12/bin/conda-env
no change /share/software/tools/miniconda/3.7/4.7.12/bin/activate
no change /share/software/tools/miniconda/3.7/4.7.12/bin/deactivate
no change /share/software/tools/miniconda/3.7/4.7.12/etc/profile.d/conda.sh
no change /share/software/tools/miniconda/3.7/4.7.12/etc/fish/conf.d/conda.fish
no change /share/software/tools/miniconda/3.7/4.7.12/shell/condabin/Conda.psm1
no change /share/software/tools/miniconda/3.7/4.7.12/shell/condabin/conda-hook.ps1
no change /share/software/tools/miniconda/3.7/4.7.12/lib/python3.7/site-packages/xontrib/conda.xsh
no change /share/software/tools/miniconda/3.7/4.7.12/etc/profile.d/conda.csh
modified /home/username/.bashrc
==> For changes to take effect, close and re-open your current shell. <==
[username@res-hpc-lo01 ~]$ conda activate Project-B
(Project-B) [username@res-hpc-lo01 ~]$
```
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