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Edit networkshares
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Nov 12, 2015
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Villerius
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@@ -33,46 +33,40 @@
|resource.isilon.lumcnet.prod.intern:/ifs/exports/data/DIV2/card-prosper-exome|
**/data/DIV2/card-prosper-exome**
|50G|
### NFS exports from Long Term Storage only for the Shark cluster
*
tesla-fs.lumcnet.prod.intern:/shark-lts/hg-groep-devilee on
**/LTstorage/HumGen/hg-groep-devilee**
*
tesla-fs.lumcnet.prod.intern:/shark-lts/hg-groep-willemsvandijk on
**/LTstorage/HumGen/hg-groep-willemsvandijk**
*
tesla-fs.lumcnet.prod.intern:/shark-lts/hem-research-archief on
**/LTstorage/DIV4/hem-research-archief**
*
tesla-fs.lumcnet.prod.intern:/shark-lts/hg-groep-peters on
**/LTstorage/HumGen/hg-groep-peters**
*
tesla-fs.lumcnet.prod.intern:/shark-lts/hg-sk-microbiota on
**/LTstorage/HumGen/hg-sk-microbiota**
*
tesla-fs.lumcnet.prod.intern:/shark-lts/fldo-storage on
**/LTstorage/HumGen/fldo-storage**
*
tesla-fs.lumcnet.prod.intern:/shark-lts/dermatlab-data on
**/LTstorage/DIV3/dermatlab-data**
*
tesla-fs.lumcnet.prod.intern:/shark-lts/hg-groep-vandermaarel on
**/LTstorage/HumGen/hg-groep-vandermaarel**
*
tesla-fs.lumcnet.prod.intern:/shark-lts/reum-lts on
**/LTstorage/DIV2/REUM**
*
tesla-fs.lumcnet.prod.intern:/shark-lts/ana-cm-data on
**/LTstorage/DIV4/ANA/cm-data**
*
tesla-fs.lumcnet.prod.intern:/shark-lts/kg-ngs-diagnostiek on
**/LTstorage/KG/ngs-diagnostiek**
*
tesla-fs.lumcnet.prod.intern:/shark-lts/hg-muscle-aging on
**/LTstorage/HumGen/hg-muscle-aging**
*
tesla-fs.lumcnet.prod.intern:/shark-lts/hg-exon-skip on
**/LTstorage/HumGen/hg-exon-skip**
*
tesla-fs.lumcnet.prod.intern:/shark-lts/group-thoen-data on
**/LTstorage/HumGen/group-thoen-data**
*
tesla-fs.lumcnet.prod.intern:/shark-lts/hg-polyglutamine-research on
**/LTstorage/HumGen/hg-polyglutamine-research**
*
tesla-fs.lumcnet.prod.intern:/shark-lts/biosemantics-archief on
**/LTstorage/HumGen/biosemantics-archief**
| NFS export | Mount point | Quota |
|-------------|:-------------:|:-----:|
|tesla-fs.lumcnet.prod.intern:/shark-lts/hg-groep-devilee|
**/LTstorage/HumGen/hg-groep-devilee**
| |
|tesla-fs.lumcnet.prod.intern:/shark-lts/hg-groep-willemsvandijk|
**/LTstorage/HumGen/hg-groep-willemsvandijk**
| |
|tesla-fs.lumcnet.prod.intern:/shark-lts/hem-research-archief|
**/LTstorage/DIV4/hem-research-archief**
| |
|tesla-fs.lumcnet.prod.intern:/shark-lts/hg-groep-peters|
**/LTstorage/HumGen/hg-groep-peters**
| |
|tesla-fs.lumcnet.prod.intern:/shark-lts/hg-sk-microbiota|
**/LTstorage/HumGen/hg-sk-microbiota**
| |
|tesla-fs.lumcnet.prod.intern:/shark-lts/fldo-storage|
**/LTstorage/HumGen/fldo-storage**
| |
|tesla-fs.lumcnet.prod.intern:/shark-lts/dermatlab-data|
**/LTstorage/DIV3/dermatlab-data**
| |
|tesla-fs.lumcnet.prod.intern:/shark-lts/hg-groep-vandermaarel|
**/LTstorage/HumGen/hg-groep-vandermaarel**
| |
|tesla-fs.lumcnet.prod.intern:/shark-lts/reum-lts|
**/LTstorage/DIV2/REUM**
| |
|tesla-fs.lumcnet.prod.intern:/shark-lts/ana-cm-data|
**/LTstorage/DIV4/ANA/cm-data**
| |
|tesla-fs.lumcnet.prod.intern:/shark-lts/kg-ngs-diagnostiek|
**/LTstorage/KG/ngs-diagnostiek**
| |
|tesla-fs.lumcnet.prod.intern:/shark-lts/hg-muscle-aging|
**/LTstorage/HumGen/hg-muscle-aging**
| |
|tesla-fs.lumcnet.prod.intern:/shark-lts/hg-exon-skip|
**/LTstorage/HumGen/hg-exon-skip**
| |
|tesla-fs.lumcnet.prod.intern:/shark-lts/group-thoen-data|
**/LTstorage/HumGen/group-thoen-data**
| |
|tesla-fs.lumcnet.prod.intern:/shark-lts/hg-polyglutamine-research|
**/LTstorage/HumGen/hg-polyglutamine-research**
| |
|tesla-fs.lumcnet.prod.intern:/shark-lts/biosemantics-archief|
**/LTstorage/HumGen/biosemantics-archief**
| |
### CIFS exports from Isilon accessible from within the LUMC
*
Nas.isilon.lumcnet.prod.intern
\l
gtc$ --
*
Only for the LGTC
!
HiSeq sequencers
*
*
Nas.isilon.lumcnet.prod.intern
\l
gtc$ -- Only for the LGTC HiSeq sequencers
### Folders on the Shark cluster
*
/data/MolEpi --
*folder for the !MolEpi and !MedStat group*
**quota size 65T**
financed by !MolEpi
*
/data/DIV5/GoNL --
*folder for the GoNL project*
**quota size 140T**
financed by LUMC, Division 5 and 70T donated by the MolEpi group
*
/data/LGTC --
*folder for the LGTC group*
**quota size 105T**
financed by the LGTC
*
/data/DIV5/HumGen --
*folder for the hg_bioinf group*
**quota size 37T**
financed by HumGen
*
/data/DIV3/huid-derl --
*folder for the huid-derl group*
**quota size 1T**
financed by huid-derl
*
/data/DIV5/SASC --
*folder for the sasc group*
**quota size 5T**
taken from the GoNL div5 part
*
/data/DIV5/BMS --
*folder for the para group*
**quota size 15T**
financed by the para group
*
/data/DIV5/KG --
*folder for the KG group*
**quota size 27T**
financed by the KG group
*
/home --
*folder for your home directory*
**quota size 1T**
financed by !MolEpi, LGTC, Div5
*
/bam-export --
*folder that can be accessed by the http://barmsijs.lumc.nl webserver*
**quota size 1T**
financed by !MolEpi, LGTC, Div5
*
/usr/local --
*folder for shared tools, reference sets, etc.*
**quote size 1T**
financed by !MolEpi, LGTC, Div5
### Special Folders on the Shark cluster
*
/home --
*folder for your home directory*
(financed by MolEpi, LGTC, Div4)
*
/bam-export --
*folder that can be accessed by the http://barmsijs.lumc.nl webserver*
(financed by MolEpi, LGTC, Div4)
*
/usr/local --
*folder for shared tools, reference sets, etc.*
(financed by MolEpi, LGTC, Div4)
*
/usr/local/Genomes -- Reference sequences and indexes.
*
/usr/local/NGSTestSets --
[
Test sets
](
testsets
)
.
### Reference Genomes, index for the most common tools (/usr/local/Genomes/*)
|
|Genome||build|
|
|
|H.Sapiens|
|
hg18,hg19,hg19_sorted|
|
|
|M.Musculus|
|
mm9,mm10_sorted|
|
| Genome | build |
|
-------------|:-------------:
|
|H.Sapiens|hg18,hg19,hg19_sorted|
|M.Musculus|mm9,mm10_sorted|
### Where to Store what data, Only for research data
||Group||Directory||what type of files||Directory Quota||
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