Commits · a358be84a6828a39a93ccfaf75fdbcf86ea7dfcb · SASC / sentinel-legacy

24 Jan, 2016 2 commits
- Update Ansible MongoDB role to add regular users · a358be84
  bow authored Jan 24, 2016
  
  a358be84
- Update requirements to MongoDB 3.2 · 74a0ba8e
  bow authored Jan 24, 2016
  
  74a0ba8e
23 Jan, 2016 2 commits
- changes in doc · c91f8209
  Sander van der Zeeuw authored Jan 22, 2016
  
  c91f8209
- Update README · 91c86848
  bow authored Jan 23, 2016
  
  91c86848
22 Jan, 2016 1 commit
- Add wait task to ensure sentinel is running · 180d4dfb
  bow authored Jan 22, 2016
  
  180d4dfb
21 Jan, 2016 24 commits
- Update biopet schemas · 954eeab6
  bow authored Jan 21, 2016
```
Merge commit '196a94dc'
```
  954eeab6
- Squashed 'sentinel-lumc/src/main/resources/schemas/biopet/' changes from 712144a..0a499a7 · 196a94dc
  bow authored Jan 21, 2016
```
0a499a7 Allow for different key name for sample-level and read group-level bam files

git-subtree-dir: sentinel-lumc/src/main/resources/schemas/biopet
git-subtree-split: 0a499a7d91db0f3c057419f1d842bde65651bcfb
```
  196a94dc
- Add Ansible steps to ensure URIs are up · 9abcd481
  bow authored Jan 21, 2016
  
  9abcd481
- Update README · 766a440b
  bow authored Jan 21, 2016
  
  766a440b
- Update README · 36580417
  bow authored Jan 21, 2016
  
  36580417
- Remove docker files · 0269d6b8
  bow authored Jan 21, 2016
  
  0269d6b8
- Add requirements file for deployment · a4c98b5b
  bow authored Jan 21, 2016
  
  a4c98b5b
- Add tasks for main service deployment using systemd · 6311ad81
  bow authored Jan 21, 2016
  
  6311ad81
- Update deployment of config file · cff94371
  bow authored Jan 21, 2016
  
  cff94371
- Fix wrong nginx template name · 491d3367
  bow authored Jan 21, 2016
  
  491d3367
- Exit immediately if bootstrap can not connect to database · 6a1dbd4c
  bow authored Jan 21, 2016
  
  6a1dbd4c
- Rename nginx template for consistency · 9163d026
  bow authored Jan 21, 2016
  
  9163d026
- Add task for creating config file · de251f9e
  bow authored Jan 21, 2016
  
  de251f9e
- Update ansible_managed string · 6610e9d3
  bow authored Jan 21, 2016
  
  6610e9d3
- Add initial tasks for JAR deployment · 35134282
  bow authored Jan 21, 2016
  
  35134282
- Refactor docs deployment into its own tasks file · 924aa86c
  bow authored Jan 21, 2016
  
  924aa86c
- Update bcrypt library version · f4d0323e
  bow authored Jan 21, 2016
  
  f4d0323e
- Point directly to sentinel scaladoc from sphinx docs · e0cc8d96
  bow authored Jan 21, 2016
  
  e0cc8d96
- Update scaladoc link in sphinx · 14838c8f
  bow authored Jan 21, 2016
  
  14838c8f
- Update nginx template · 982644d2
  bow authored Jan 21, 2016
  
  982644d2
- Add task to ensure docs are copied correctly · e8138fde
  bow authored Jan 21, 2016
  
  e8138fde
- Add step for removing existing docs based on repo update · 5f0e2586
  bow authored Jan 21, 2016
  
  5f0e2586
- Update link to scaladoc from sphinx · e1110356
  bow authored Jan 21, 2016
  
  e1110356
- Initial working nginx deployment with the docs · d1cec892
  bow authored Jan 21, 2016
  
  d1cec892
20 Jan, 2016 11 commits
- Track scaladoc and sphinx separately in deployment · 30c7854b
  bow authored Jan 20, 2016
  
  30c7854b
- Add initial tasks for sbt release · b8ed4b57
  bow authored Jan 20, 2016
  
  b8ed4b57
- Expose ScalaSeries as a SettingKey · 1b405540
  bow authored Jan 20, 2016
  
  1b405540
- Update SentinelBuild with more detailed values · 1723fc67
  bow authored Jan 20, 2016
  
  1723fc67
- Update sphinx alabaster theme version requirement · 9cc83943
  bow authored Jan 20, 2016
  
  9cc83943
- Use a single directory for checkout in Ansible · 72d85d56
  bow authored Jan 20, 2016
  
  72d85d56
- Add initial ansible sbt tasks · 3b1b039a
  bow authored Jan 20, 2016
  
  3b1b039a
- Add Sentinel checkout tasks · 1473cf09
  bow authored Jan 20, 2016
  
  1473cf09
- Update .gitignore · 04c76ce2
  bow authored Jan 20, 2016
  
  04c76ce2
- Restructure deployment directory · 49b9861f
  bow authored Jan 20, 2016
```
There were some infinite symlink loops previously that causes the
sbt-git plugin to recurse indefinitely.
```
  49b9861f
- Use yes/no instead of true/false consistently in ansible files · d891294e
  bow authored Jan 20, 2016
  
  d891294e