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SASC
sentinel-legacy
Commits
sentinel-legacy
06 Jul, 2015
2 commits
Refactor Processors base classes
· 877cb631
bow
authored
Jul 06, 2015
877cb631
Renames for consistency
· b4a35669
bow
authored
Jul 06, 2015
b4a35669
05 Jul, 2015
1 commit
Flatten library docs into its own MongoDB collection
· 1d4a2df0
bow
authored
Jul 04, 2015
1d4a2df0
03 Jul, 2015
1 commit
Rename 'unsupported' pipeline to 'plain' pipeline
· 6f0fdc53
bow
authored
Jul 03, 2015
6f0fdc53
02 Jul, 2015
3 commits
Rename /api-spec -> /api-specs and set URL detection in docs page correctly
· 0664f861
bow
authored
Jul 02, 2015
0664f861
Redirect root to UI docs instead of specs
· a00812ff
bow
authored
Jul 02, 2015
a00812ff
Rename PipelineStats.name -> PipelineStats.pipelineName
· 9f8bbb62
bow
authored
Jul 02, 2015
9f8bbb62
01 Jul, 2015
3 commits
More ScalaDoc for MongodbAccessObject
· 7af10190
bow
authored
Jul 01, 2015
7af10190
Define custom path for ScalaDoc output
· 0b87aa7b
bow
authored
Jul 01, 2015
0b87aa7b
Remove scaladomain sphinx module
· ff5fd245
bow
authored
Jul 01, 2015
ff5fd245
30 Jun, 2015
4 commits
Add missing json.gz files
· 6da91254
bow
authored
Jun 30, 2015
6da91254
Add simple logging to endpoints
· d69a576e
bow
authored
Jun 30, 2015
d69a576e
Add swagger-ui live documentation page
· 956d424d
bow
authored
Jun 30, 2015
956d424d
Rename api-docs endpoint to api-spec
· f84b8a20
bow
authored
Jun 30, 2015
f84b8a20
29 Jun, 2015
10 commits
Rename ReferenceRecord.name -> ReferenceRecord.refName
· f5280322
bow
authored
Jun 29, 2015
f5280322
Rename RunRecord.name -> RunRecord.runName
· 6689ded3
bow
authored
Jun 29, 2015
6689ded3
Update example files to new schema files
· e3d4b41f
bow
authored
Jun 29, 2015
e3d4b41f
Update ReferencesControllerSpec for schema updates
· 3bca7d2e
bow
authored
Jun 29, 2015
3bca7d2e
Make CollectRnaSeqHistogram histogram optional in spec
· a867af68
bow
authored
Jun 29, 2015
a867af68
Update gentrap v0.4 schema: flexiprep section
· 46b18dbc
bow
authored
Jun 29, 2015
46b18dbc
Update gentrap v0.4 schema: mapping section
· c9d9587f
bow
authored
Jun 29, 2015
c9d9587f
Update gentrap v0.4 schema and parsing: bam metrics section
· 20993a69
bow
authored
Jun 29, 2015
20993a69
Update gentrap v0.4 schema and parsing: reference section
· 7d6e11c2
bow
authored
Jun 29, 2015
7d6e11c2
Update gentrap v0.4 schema and parsing: meta section
· 17e3c5c7
bow
authored
Jun 29, 2015
17e3c5c7
26 Jun, 2015
2 commits
Add 'readAll' attribute to seq stats for combining read1 and read2 stats
· f5f18a61
bow
authored
Jun 26, 2015
f5f18a61
Add statistics for 5' - 3' bias
· ba7ca1c2
bow
authored
Jun 26, 2015
ba7ca1c2
24 Jun, 2015
12 commits
Set default Jetty port via config
· a61eed16
bow
authored
Jun 24, 2015
a61eed16
Add command alias for assembly with all tests
· 4eb2bc5e
bow
authored
Jun 24, 2015
4eb2bc5e
Set compilation target to JVM 1.8
· 613fec46
bow
authored
Jun 24, 2015
613fec46
Add git-stamp plugin to add git info to assemblies
· 98480aae
bow
authored
Jun 24, 2015
98480aae
Update assembled JAR name
· 97abf3f1
bow
authored
Jun 24, 2015
97abf3f1
Formatting fix
· 7629d65d
bow
authored
Jun 24, 2015
7629d65d
Add optional authentication for MongoDB connection
· c7b43650
bow
authored
Jun 24, 2015
c7b43650
Allow db settings to be set at jetty runtime
· eda48025
bow
authored
Jun 24, 2015
eda48025
Add plugin and settings for JAR assembly
· 6420c29b
bow
authored
Jun 24, 2015
6420c29b
Add initial embedded Jetty launcher
· 02105486
bow
authored
Jun 24, 2015
02105486
Make jetty available for compilation
· 60c62197
bow
authored
Jun 24, 2015
60c62197
Reorganize sbt plugins
· 011c9655
bow
authored
Jun 24, 2015
011c9655
23 Jun, 2015
2 commits
Add missing tests for gzipped uploads
· 9a4f1111
bow
authored
Jun 23, 2015
9a4f1111
Add general notFound method
· 6c2b7ab1
bow
authored
Jun 23, 2015
6c2b7ab1