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SASC
sentinel-legacy
Commits
sentinel-legacy
15 May, 2015
1 commit
Enable auto-scalariform and remove unused project settings
· 054d506c
bow
authored
May 15, 2015
054d506c
14 May, 2015
4 commits
Initialize processor validators at compile-time
· 2809e75a
bow
authored
May 14, 2015
2809e75a
Update README
· f11663f1
bow
authored
May 14, 2015
f11663f1
Simplify validation and input parsing adapter traits for processors
· 0818d38d
bow
authored
May 14, 2015
0818d38d
Refactor validator and create base trait with implicits
· 402ca7bf
bow
authored
May 14, 2015
402ca7bf
13 May, 2015
20 commits
Use explicit methods for extracting values Gentrap summary
· bf267041
bow
authored
May 13, 2015
bf267041
Fix wrong error message for enum-related parameters
· fde7ad8c
bow
authored
May 13, 2015
fde7ad8c
Initial implementation of GET /runs
· 78c45276
bow
authored
May 13, 2015
78c45276
Initial implementation GET on /runs/{runId}
· 9cccf8b5
bow
authored
May 13, 2015
9cccf8b5
Use ObjectId consistently internally
· 389ffc2d
bow
authored
May 13, 2015
389ffc2d
Fix wrong parameter in /runs specification
· c2da206c
bow
authored
May 13, 2015
c2da206c
Allow generic, unsupported JSONs to be uploaded via POST /runs
· ed000e8b
bow
authored
May 13, 2015
ed000e8b
Add processor for unsupported JSONs
· fa8036a9
bow
authored
May 13, 2015
fa8036a9
Add schema for unsupported JSONs
· 64230b21
bow
authored
May 13, 2015
64230b21
Set annotIds and refIds to be optional in RunDocument
· c34975cf
bow
authored
May 13, 2015
c34975cf
Update README
· be4c7e8e
bow
authored
May 13, 2015
be4c7e8e
Update schema and schema examples directory
· 57e76e06
bow
authored
May 13, 2015
57e76e06
Implement GET /stats/runs
· 14a07c2d
bow
authored
May 13, 2015
14a07c2d
Define runs collection name in the base trait
· 5e20e2b9
bow
authored
May 13, 2015
5e20e2b9
Refactor documents for general run statistics
· aad0c73e
bow
authored
May 13, 2015
aad0c73e
Update GET /stats/sequences/gentrap
· 8dff5413
bow
authored
May 13, 2015
8dff5413
Add enums for sequence QC phase
· abdf8b39
bow
authored
May 13, 2015
abdf8b39
Add initial implementation for seq statistics query function for Gentrap
· 897b6931
bow
authored
May 13, 2015
897b6931
Update Gentrap documents
· d440e70d
bow
authored
May 13, 2015
d440e70d
Update base document models to handle single vs paired-end reads better
· 166a2a85
bow
authored
May 13, 2015
166a2a85
12 May, 2015
15 commits
Add ObjectId serializer for /references endpoint
· bd7e3ab5
bow
authored
May 12, 2015
bd7e3ab5
Fix naming errors
· 5d864852
bow
authored
May 12, 2015
5d864852
Implement /references endpoint
· 8b0fc55c
bow
authored
May 12, 2015
8b0fc55c
Update AnnotationsProcessor
· de931d8b
bow
authored
May 12, 2015
de931d8b
Add creationTime to Reference objects
· 0b290b0a
bow
authored
May 12, 2015
0b290b0a
Update README
· 01044a50
bow
authored
May 12, 2015
01044a50
Implement GET /annotations/{annotId}
· 4b3bc447
bow
authored
May 12, 2015
4b3bc447
Make database parameter implicit
· 4b9acc8f
bow
authored
May 12, 2015
4b9acc8f
Update missed 'unknown' params and missed spacing errors
· 7df4944c
bow
authored
May 12, 2015
7df4944c
Fix spacing errors in endpoints spec
· 379d617d
bow
authored
May 12, 2015
379d617d
Rename 'unknown' pipeline parameter to 'unsupported'
· 6e0f8881
bow
authored
May 12, 2015
6e0f8881
Make pipeline parameter required in POST /runs spec
· 384be03c
bow
authored
May 12, 2015
384be03c
Fix POST /runs specification to only allow a single pipeline
· 92da57b6
bow
authored
May 12, 2015
92da57b6
Remove dev artifacts
· 29e43829
bow
authored
May 12, 2015
29e43829
Fix endpoints specification on /runs requiring userId and runId
· 0140ca11
bow
authored
May 12, 2015
0140ca11
