Commit 196a94dc authored by bow's avatar bow
Browse files

Squashed 'sentinel-lumc/src/main/resources/schemas/biopet/' changes from 712144a..0a499a7

0a499a7 Allow for different key name for sample-level and read group-level bam files

git-subtree-dir: sentinel-lumc/src/main/resources/schemas/biopet
git-subtree-split: 0a499a7d91db0f3c057419f1d842bde65651bcfb
parent 246e1ec2
......@@ -173,8 +173,16 @@
"pipeline": {
"description": "Sample-level Gentrap files",
"type": "object",
"required": [ "alignment" ],
"additionalProperties": { "$ref": "#/definitions/file" }
"anyOf": [
{
"required": [ "alignment" ],
"additionalProperties": { "$ref": "#/definitions/file" }
},
{
"required": [ "output_bam" ],
"additionalProperties": { "$ref": "#/definitions/file" }
}
]
}
},
"additionalProperties": { "$ref": "#/definitions/fileGroup" }
......@@ -357,8 +365,16 @@
"pipeline": {
"description": "Library-level Gentrap files",
"type": "object",
"required": [ "alignment" ],
"additionalProperties": { "$ref": "#/definitions/file" }
"anyOf": [
{
"required": [ "alignment" ],
"additionalProperties": { "$ref": "#/definitions/file" }
},
{
"required": [ "output_bam" ],
"additionalProperties": { "$ref": "#/definitions/file" }
}
]
}
},
"additionalProperties": { "$ref": "#/definitions/fileGroup" }
......
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