bacteria.json 897 Bytes
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{
  "FilterDomainFastas.filterScriptPath": "/exports/sascstudent/project-RefseqRelease/src/demo_test/refseqtools/filter_fasta.py", 
  "FilterDomainFastas.includeAccFile": "/exports/sascstudent/project-RefseqRelease/data/accession_sets/bacteria_rep/accessions.txt",
  "FilterDomainFastas.domainInputDir": "/exports/sascstudent/project-RefseqRelease/data/release90/library/bacteria",
  "FilterDomainFastas.taxDbPath": "/exports/sascstudent/project-RefseqRelease/data/taxonomy/ete3_taxadb",
  "FilterDomainFastas.outputDir": "/exports/sascstudent/project-RefseqRelease/analysis/complete90/library_filtered/bacteria",
  "FilterDomainFastas.FilterFasta.preCommand": "source activate ete3",
  "FilterDomainFastas.dustmaskerExe": "/home/npappas/src/ncbi-blast-2.6.0+/bin/dustmasker",
  "FilterDomainFastas.refseqJson": "/exports/sascstudent/project-RefseqRelease/analysis/demo_test/Refseq90.DNA.json"
}