1. 13 Nov, 2015 1 commit
    • Vermaat's avatar
      wip · 43323c05
      Vermaat authored
      43323c05
  2. 09 Nov, 2015 1 commit
  3. 08 Nov, 2015 1 commit
  4. 05 Nov, 2015 1 commit
    • Vermaat's avatar
      Fix counters reporting on about page · efee4adb
      Vermaat authored
      We forgot to include the description extractor in the totals. Also,
      it said batch jobs were excluded from the totals, which is not the
      case.
      efee4adb
  5. 04 Nov, 2015 1 commit
  6. 03 Nov, 2015 2 commits
  7. 02 Nov, 2015 4 commits
  8. 26 Oct, 2015 2 commits
  9. 24 Sep, 2015 1 commit
  10. 23 Sep, 2015 1 commit
    • Vermaat's avatar
      Show diff for variant protein from non-reference start codon · 3c98a1af
      Vermaat authored
      The alternative variant protein sequence translated from a
      non-reference start codon (created by the variant), was not
      color-diffed as normal variant protein sequences are.
      
      In the process we also rename the `oldprotein` and `newprotein`
      fields in the output object to `oldProtein` and `newProtein` to
      be more consistent with other field names.
      3c98a1af
  11. 09 Jul, 2015 1 commit
  12. 03 Jul, 2015 1 commit
  13. 31 May, 2015 2 commits
  14. 26 May, 2015 4 commits
  15. 18 May, 2015 3 commits
    • Vermaat's avatar
      Limit input sequence length for description extractor · 54188c59
      Vermaat authored
      This is hopefully a temporary measure. At the moment we cannot accurately
      predict the running time of the extractor, so we have to aggressively
      limit the input based on the worst-case expectation.
      
      As a worst-case scenario, we currently use random input sequences, where
      length 1000bp yields about 500ms of running time.
      
      In the future we hope to either:
      
      1. Predict the running time and abort if needed.
      2. Keep track of the running time and abort if needed.
      3. Run the extractor in a task scheduler with a running time limit.
      54188c59
    • Vermaat's avatar
      Link to description extractor project page · febfe186
      Vermaat authored
      febfe186
    • Jeroen F.J. Laros's avatar
      New description extractor web interface · 55d10b82
      Jeroen F.J. Laros authored and Vermaat's avatar Vermaat committed
      We can now compare two sequences by supplying their sequence strings,
      accession numbers, or uploaded file.
      55d10b82
  16. 01 May, 2015 3 commits
  17. 30 Apr, 2015 1 commit
  18. 10 Feb, 2015 1 commit
  19. 09 Jan, 2015 1 commit
  20. 08 Dec, 2014 5 commits
  21. 24 Nov, 2014 3 commits