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  • Vermaat's avatar
    Translate alternative start to M, also in variant · ae70ddfd
    Vermaat authored
    In case of an alternative start codon, the variant CDS was not
    translated to a protein starting with M. This caused the protein
    description machinery to conclude a variant affecting the start
    codon, hence reporting `p.?`.
    
    We fix this by always translating the start codon to M (except
    when the variant actually affects it).
    
    Example: `NM_024426.4:c.1107A>G` (a synomymous mutation) should
    yield `NM_024426.4(WT1_i001):p.(=)`, not `p.?`. The start codon
    for that protein is `CTG`.
    ae70ddfd