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  • Vermaat's avatar
    Limit input sequence length for description extractor · 54188c59
    Vermaat authored
    This is hopefully a temporary measure. At the moment we cannot accurately
    predict the running time of the extractor, so we have to aggressively
    limit the input based on the worst-case expectation.
    
    As a worst-case scenario, we currently use random input sequences, where
    length 1000bp yields about 500ms of running time.
    
    In the future we hope to either:
    
    1. Predict the running time and abort if needed.
    2. Keep track of the running time and abort if needed.
    3. Run the extractor in a task scheduler with a running time limit.
    54188c59