From 58bdbf60066eac877dfe0a42f17f81919780ba0b Mon Sep 17 00:00:00 2001
From: Martijn Vermaat <martijn@vermaat.name>
Date: Mon, 24 Sep 2012 12:02:56 +0000
Subject: [PATCH] Case insensitive gene reference loader (#118)
git-svn-id: https://humgenprojects.lumc.nl/svn/mutalyzer/trunk@605 eb6bd6ab-9ccd-42b9-aceb-e2899b4a52f1
---
mutalyzer/Retriever.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/mutalyzer/Retriever.py b/mutalyzer/Retriever.py
index 48750a93..0cb76ef3 100644
--- a/mutalyzer/Retriever.py
+++ b/mutalyzer/Retriever.py
@@ -585,7 +585,7 @@ class GenBankRetriever(Retriever):
'Could not get mapping information for gene %s.' % gene)
return None
- if summary[0]["NomenclatureSymbol"] == gene : # Found it.
+ if summary[0]["NomenclatureSymbol"].lower() == gene.lower() : # Found it.
if not summary[0]["GenomicInfo"] :
self._output.addMessage(__file__, 4, "ENOMAPPING",
"No mapping information found for gene %s." % gene)
--
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