diff --git a/INSTALL b/INSTALL index 3b799b4a8b26d7c13e8632b801670bd1834c1fb6..72856076359cfbfdb6abcb51340a8f1546ff5548 100644 --- a/INSTALL +++ b/INSTALL @@ -132,10 +132,6 @@ Now run the tests: MUTALYZER_ENV=test nosetests -Note: Currently it is not advised to run the tests on a production server -since they need write access to the main Mutalyzer cache and log. A separate -cache and log for local users and tests is planned functionality. - Upgrade Mutalyzer ----------------- diff --git a/README b/README index 5120e879d2f3cf1e0dfcb8911607a7a4d69a8a70..00f3e6d4ef64a15c1c8b8a89a826f8d5cecfa1f2 100644 --- a/README +++ b/README @@ -19,7 +19,8 @@ See the INSTALL file for installation instructions. Unit tests ---------- -The unit tests depend on a running batch daemon and SOAP webservice: +The unit tests depend on a running batch daemon, webserver, and SOAP +webservice: sudo /etc/init.d/mutalyzer-batchd start sudo /etc/init.d/apache2 start @@ -32,10 +33,6 @@ Or, if you are in a hurry, skip the long-running tests with: MUTALYZER_ENV=test MUTALYZER_QUICK_TEST=1 nosetests -v -Note: Currently it is not advised to run the tests on a production server -since they need write access to the main Mutalyzer cache and log. A separate -cache and log for local users and tests is planned functionality. - Development notes ----------------- @@ -130,3 +127,25 @@ Automatic remote deployment depends on Fabric: The unit tests depend on the following packages: - python-nose >= 0.11 - python-webtest >= 1.2.3 + +As of 2011-08-23, snakefood reports the following imports from the Mutalyzer +source code (excluding the standard library imports): + + Bio + MySQLdb + SOAPpy + configobj + daemon + fabric + lockfile + lxml + magic + nose + pyparsing + setuptools + simpletal + soaplib + suds + web + webtest + xlrd