diff --git a/mutalyzer/db/models.py b/mutalyzer/db/models.py
index 03e6bf5bced054e8e45e4fcf4f22698f95c6fcde..b6e397e34bd543e02f729243edfa17a493a79b07 100644
--- a/mutalyzer/db/models.py
+++ b/mutalyzer/db/models.py
@@ -422,37 +422,30 @@ class TranscriptMapping(db.Base):
source, transcript=1, cds=None,
select_transcript=False, version=None):
"""
- Returns an existing :class:`TranscriptMapping` instance with the given
- values for `chromosome`, `accession`, `version`, `gene`, and
- `transcript` if it exists, or a new instance otherwise.
+ Returns an :class:`TranscriptMapping` instance with the given values.
+ If a row with a duplicate key already exists, it is deleted first.
.. note:: Unfortunately, SQLAlchemy does not have `ON DUPLICATE KEY
UPDATE` functionality, which would performance-wise be the best
- way to update transcript mappings. This class method implements an
- alternative albeit at the cost of querying the table for an
- existing entry on each update.
+ way to update transcript mappings. Even if it had, PostgreSQL does
+ not. This class method implements an alternative albeit at the
+ cost of querying the table for an existing entry on each update.
+
+ From PostgreSQL 9.5 we do have ``INSERT ... ON CONFLICT DO UPDATE``
+ which we might want to use in the future.
+
+ http://stackoverflow.com/questions/17267417/how-do-i-do-an-upsert-merge-insert-on-duplicate-update-in-postgresql
"""
- instance = cls.query.filter_by(
+ # Actually we should do a `lock transcript_mappings in exclusive mode;`
+ # to prevent concurrent reads to miss this entry.
+ cls.query.filter_by(
chromosome=chromosome, accession=accession, version=version,
- gene=gene, transcript=transcript).first()
- if instance is None:
- instance = cls(chromosome, reference_type, accession, gene,
- orientation, start, stop, exon_starts, exon_stops,
- source, transcript=transcript, cds=cds,
- select_transcript=select_transcript,
- version=version)
- else:
- instance.reference_type = reference_type
- instance.orientation = orientation
- instance.start = start
- instance.stop = stop
- instance.bin = binning.assign_bin(start - 1, stop)
- instance.exon_starts = exon_starts
- instance.exon_stops = exon_stops
- instance.source = source
- instance.cds = cds
- instance.select_transcript = select_transcript
- return instance
+ gene=gene, transcript=transcript
+ ).delete()
+ return cls(chromosome, reference_type, accession, gene, orientation,
+ start, stop, exon_starts, exon_stops, source,
+ transcript=transcript, cds=cds,
+ select_transcript=select_transcript, version=version)
@property
def coding(self):
diff --git a/tests/data/hg19.chr11.111771755-112247252.seq_gene.sorted.md b/tests/data/hg19.chr11.111771755-112247252.seq_gene.sorted.md
new file mode 100644
index 0000000000000000000000000000000000000000..f0015dc66c111c9e7559acf41d9f34290fc0a252
--- /dev/null
+++ b/tests/data/hg19.chr11.111771755-112247252.seq_gene.sorted.md
@@ -0,0 +1,689 @@
+#tax_id chromosome chr_start chr_stop chr_orient contig ctg_start ctg_stop ctg_orient feature_name feature_id feature_type group_label transcript evidence_code
+9606 11 111989549 111990224 - NW_004929381.1 15668978 15669653 - RPS6P16 GeneID:100128923 GENE CHM1_1.1-Primary Assembly -
+9606 11 111989549 111990224 - NW_004929381.1 15668978 15669653 - RPS6P16 GeneID:100128923 PSEUDO CHM1_1.1-Primary Assembly -
+9606 11 112106087 112106762 - NT_033899.8 15668503 15669178 - RPS6P16 GeneID:100128923 GENE GRCh37.p13-Primary Assembly -
+9606 11 112106087 112106762 - NT_033899.8 15668503 15669178 - RPS6P16 GeneID:100128923 PSEUDO GRCh37.p13-Primary Assembly -
+9606 11 111972421 111972914 + NW_004929381.1 15651850 15652343 + RPS12P21 GeneID:100271550 GENE CHM1_1.1-Primary Assembly -
+9606 11 111972421 111972914 + NW_004929381.1 15651850 15652343 + RPS12P21 GeneID:100271550 PSEUDO CHM1_1.1-Primary Assembly -
+9606 11 112088967 112089460 + NT_033899.8 15651383 15651876 + RPS12P21 GeneID:100271550 GENE GRCh37.p13-Primary Assembly -
+9606 11 112088967 112089460 + NT_033899.8 15651383 15651876 + RPS12P21 GeneID:100271550 PSEUDO GRCh37.p13-Primary Assembly -
+9606 11 112215575 112216012 - NW_004929381.1 15895004 15895441 - RPL23AP62 GeneID:100271617 GENE CHM1_1.1-Primary Assembly -
+9606 11 112215575 112216012 - NW_004929381.1 15895004 15895441 - RPL23AP62 GeneID:100271617 PSEUDO CHM1_1.1-Primary Assembly -
+9606 11 111934941 111936089 + NW_004929381.1 15614370 15615518 + LOC100422242 GeneID:100422242 GENE CHM1_1.1-Primary Assembly -
+9606 11 111934941 111936089 + NW_004929381.1 15614370 15615518 + LOC100422242 GeneID:100422242 PSEUDO CHM1_1.1-Primary Assembly -
+9606 11 112051496 112052645 + NT_033899.8 15613912 15615061 + LOC100422242 GeneID:100422242 GENE GRCh37.p13-Primary Assembly -
+9606 11 112051496 112052645 + NT_033899.8 15613912 15615061 + LOC100422242 GeneID:100422242 PSEUDO GRCh37.p13-Primary Assembly -
+9606 11 112044282 112044590 + NW_004929381.1 15723711 15724019 + XR_252966.1 GeneID:100506870 UTR CHM1_1.1-Primary Assembly XR_252966.1 -
+9606 11 112044282 112045860 + NW_004929381.1 15723711 15725289 + LOC100506870 GeneID:100506870 GENE CHM1_1.1-Primary Assembly -
+9606 11 112044282 112045860 + NW_004929381.1 15723711 15725289 + XR_252966.1 GeneID:100506870 RNA CHM1_1.1-Primary Assembly XR_252966.1
+9606 11 112044357 112044590 + NW_004929381.1 15723786 15724019 + XR_252967.1 GeneID:100506870 UTR CHM1_1.1-Primary Assembly XR_252967.1 -
+9606 11 112044357 112045860 + NW_004929381.1 15723786 15725289 + XR_252967.1 GeneID:100506870 RNA CHM1_1.1-Primary Assembly XR_252967.1
+9606 11 112045328 112045860 + NW_004929381.1 15724757 15725289 + XR_252967.1 GeneID:100506870 UTR CHM1_1.1-Primary Assembly XR_252967.1 -
+9606 11 112045401 112045860 + NW_004929381.1 15724830 15725289 + XR_252966.1 GeneID:100506870 UTR CHM1_1.1-Primary Assembly XR_252966.1 -
+9606 11 112160924 112161232 + NT_033899.8 15723340 15723648 + XR_246471.1 GeneID:100506870 UTR GRCh37.p13-Primary Assembly XR_246471.1 -
+9606 11 112160924 112162502 + NT_033899.8 15723340 15724918 + LOC100506870 GeneID:100506870 GENE GRCh37.p13-Primary Assembly -
+9606 11 112160924 112162502 + NT_033899.8 15723340 15724918 + XR_246471.1 GeneID:100506870 RNA GRCh37.p13-Primary Assembly XR_246471.1
+9606 11 112160999 112161232 + NT_033899.8 15723415 15723648 + XR_246472.1 GeneID:100506870 UTR GRCh37.p13-Primary Assembly XR_246472.1 -
+9606 11 112160999 112162502 + NT_033899.8 15723415 15724918 + XR_246472.1 GeneID:100506870 RNA GRCh37.p13-Primary Assembly XR_246472.1
+9606 11 112161970 112162502 + NT_033899.8 15724386 15724918 + XR_246472.1 GeneID:100506870 UTR GRCh37.p13-Primary Assembly XR_246472.1 -
+9606 11 112162043 112162502 + NT_033899.8 15724459 15724918 + XR_246471.1 GeneID:100506870 UTR GRCh37.p13-Primary Assembly XR_246471.1 -
+9606 11 111783460 111783647 + NT_033899.8 15345876 15346063 + NR_037651.1 GeneID:100528019 UTR GRCh37.p13-Primary Assembly NR_037651.1 -
+9606 11 111783460 111797595 + NT_033899.8 15345876 15360011 + HSPB2-C11orf52 GeneID:100528019 GENE GRCh37.p13-Primary Assembly -
+9606 11 111783460 111797595 + NT_033899.8 15345876 15360011 + NR_037651.1 GeneID:100528019 RNA GRCh37.p13-Primary Assembly NR_037651.1
+9606 11 111789402 111789728 + NT_033899.8 15351818 15352144 + NR_037651.1 GeneID:100528019 UTR GRCh37.p13-Primary Assembly NR_037651.1 -
+9606 11 111795050 111795087 + NT_033899.8 15357466 15357503 + NR_037651.1 GeneID:100528019 UTR GRCh37.p13-Primary Assembly NR_037651.1 -
+9606 11 111796377 111796438 + NT_033899.8 15358793 15358854 + NR_037651.1 GeneID:100528019 UTR GRCh37.p13-Primary Assembly NR_037651.1 -
+9606 11 111796684 111797595 + NT_033899.8 15359100 15360011 + NR_037651.1 GeneID:100528019 UTR GRCh37.p13-Primary Assembly NR_037651.1 -
+9606 11 112119672 112120353 + NW_004929381.1 15799101 15799782 + XR_252969.1 GeneID:101928774 UTR CHM1_1.1-Primary Assembly XR_252969.1 -
+9606 11 112119672 112121087 + NW_004929381.1 15799101 15800516 + LOC101928774 GeneID:101928774 GENE CHM1_1.1-Primary Assembly -
+9606 11 112119672 112121087 + NW_004929381.1 15799101 15800516 + XR_252969.1 GeneID:101928774 RNA CHM1_1.1-Primary Assembly XR_252969.1
+9606 11 112120549 112121087 + NW_004929381.1 15799978 15800516 + XR_252969.1 GeneID:101928774 UTR CHM1_1.1-Primary Assembly XR_252969.1 -
+9606 11 112236297 112236978 + NT_033899.8 15798713 15799394 + XR_246473.1 GeneID:101928774 UTR GRCh37.p13-Primary Assembly XR_246473.1 -
+9606 11 112236297 112237712 + NT_033899.8 15798713 15800128 + LOC101928774 GeneID:101928774 GENE GRCh37.p13-Primary Assembly -
+9606 11 112236297 112237712 + NT_033899.8 15798713 15800128 + XR_246473.1 GeneID:101928774 RNA GRCh37.p13-Primary Assembly XR_246473.1
+9606 11 112237174 112237712 + NT_033899.8 15799590 15800128 + XR_246473.1 GeneID:101928774 UTR GRCh37.p13-Primary Assembly XR_246473.1 -
+9606 11 112147217 112147340 + NW_004929381.1 15826646 15826769 + XR_252971.1 GeneID:101928823 UTR CHM1_1.1-Primary Assembly XR_252971.1 -
+9606 11 112147404 112147510 + NW_004929381.1 15826833 15826939 + XR_252971.1 GeneID:101928823 UTR CHM1_1.1-Primary Assembly XR_252971.1 -
+9606 11 111817924 111818081 - NW_004929381.1 15497353 15497510 - NM_001082619.1 GeneID:120379 UTR CHM1_1.1-Primary Assembly NM_001082619.1 -
+9606 11 111817924 111828074 - NW_004929381.1 15497353 15507503 - NM_001082619.1 GeneID:120379 RNA CHM1_1.1-Primary Assembly NM_001082619.1 best RefSeq;identical;N
+9606 11 111817924 111828074 - NW_004929381.1 15497353 15507503 - PIH1D2 GeneID:120379 GENE CHM1_1.1-Primary Assembly - best RefSeq;identical;N
+9606 11 111818082 111818135 - NW_004929381.1 15497511 15497564 - NP_001076088.1 GeneID:120379 CDS CHM1_1.1-Primary Assembly NM_001082619.1 -
+9606 11 111821721 111821793 - NW_004929381.1 15501150 15501222 - NM_138789.3 GeneID:120379 UTR CHM1_1.1-Primary Assembly NM_138789.3 -
+9606 11 111821721 111828074 - NW_004929381.1 15501150 15507503 - NM_138789.3 GeneID:120379 RNA CHM1_1.1-Primary Assembly NM_138789.3 best RefSeq;identical;N
+9606 11 111821794 111821928 - NW_004929381.1 15501223 15501357 - NP_620144.1 GeneID:120379 CDS CHM1_1.1-Primary Assembly NM_138789.3 -
+9606 11 111824360 111824625 - NW_004929381.1 15503789 15504054 - NP_001076088.1 GeneID:120379 CDS CHM1_1.1-Primary Assembly NM_001082619.1 -
+9606 11 111824360 111824625 - NW_004929381.1 15503789 15504054 - NP_620144.1 GeneID:120379 CDS CHM1_1.1-Primary Assembly NM_138789.3 -
+9606 11 111824962 111825207 - NW_004929381.1 15504391 15504636 - NP_001076088.1 GeneID:120379 CDS CHM1_1.1-Primary Assembly NM_001082619.1 -
+9606 11 111824962 111825207 - NW_004929381.1 15504391 15504636 - NP_620144.1 GeneID:120379 CDS CHM1_1.1-Primary Assembly NM_138789.3 -
+9606 11 111825559 111825682 - NW_004929381.1 15504988 15505111 - NP_001076088.1 GeneID:120379 CDS CHM1_1.1-Primary Assembly NM_001082619.1 -
+9606 11 111825559 111825682 - NW_004929381.1 15504988 15505111 - NP_620144.1 GeneID:120379 CDS CHM1_1.1-Primary Assembly NM_138789.3 -
+9606 11 111826901 111827077 - NW_004929381.1 15506330 15506506 - NP_001076088.1 GeneID:120379 CDS CHM1_1.1-Primary Assembly NM_001082619.1 -
+9606 11 111826901 111827077 - NW_004929381.1 15506330 15506506 - NP_620144.1 GeneID:120379 CDS CHM1_1.1-Primary Assembly NM_138789.3 -
+9606 11 111827078 111827108 - NW_004929381.1 15506507 15506537 - NM_001082619.1 GeneID:120379 UTR CHM1_1.1-Primary Assembly NM_001082619.1 -
+9606 11 111827078 111827108 - NW_004929381.1 15506507 15506537 - NM_138789.3 GeneID:120379 UTR CHM1_1.1-Primary Assembly NM_138789.3 -
+9606 11 111827883 111828074 - NW_004929381.1 15507312 15507503 - NM_001082619.1 GeneID:120379 UTR CHM1_1.1-Primary Assembly NM_001082619.1 -
+9606 11 111827883 111828074 - NW_004929381.1 15507312 15507503 - NM_138789.3 GeneID:120379 UTR CHM1_1.1-Primary Assembly NM_138789.3 -
+9606 11 111934734 111934891 - NT_033899.8 15497150 15497307 - NM_001082619.1 GeneID:120379 UTR GRCh37.p13-Primary Assembly NM_001082619.1 -
+9606 11 111934734 111944895 - NT_033899.8 15497150 15507311 - NM_001082619.1 GeneID:120379 RNA GRCh37.p13-Primary Assembly NM_001082619.1 best RefSeq;identical;N
+9606 11 111934734 111944895 - NT_033899.8 15497150 15507311 - PIH1D2 GeneID:120379 GENE GRCh37.p13-Primary Assembly - best RefSeq;identical;N
+9606 11 111934892 111934945 - NT_033899.8 15497308 15497361 - NP_001076088.1 GeneID:120379 CDS GRCh37.p13-Primary Assembly NM_001082619.1 -
+9606 11 111938522 111938594 - NT_033899.8 15500938 15501010 - NM_138789.3 GeneID:120379 UTR GRCh37.p13-Primary Assembly NM_138789.3 -
+9606 11 111938522 111944895 - NT_033899.8 15500938 15507311 - NM_138789.3 GeneID:120379 RNA GRCh37.p13-Primary Assembly NM_138789.3 best RefSeq;identical;N
+9606 11 111938526 111938594 - NT_033899.8 15500942 15501010 - XM_005271403.1 GeneID:120379 UTR GRCh37.p13-Primary Assembly XM_005271403.1 -
+9606 11 111938526 111944704 - NT_033899.8 15500942 15507120 - XM_005271403.1 GeneID:120379 RNA GRCh37.p13-Primary Assembly XM_005271403.1 mRNA;identical;N
+9606 11 111938595 111938729 - NT_033899.8 15501011 15501145 - GeneID:120379 CDS GRCh37.p13-Primary Assembly XM_005271403.1 -
+9606 11 111938595 111938729 - NT_033899.8 15501011 15501145 - NP_620144.1 GeneID:120379 CDS GRCh37.p13-Primary Assembly NM_138789.3 -
+9606 11 111941160 111941425 - NT_033899.8 15503576 15503841 - GeneID:120379 CDS GRCh37.p13-Primary Assembly XM_005271403.1 -
+9606 11 111941160 111941425 - NT_033899.8 15503576 15503841 - NP_001076088.1 GeneID:120379 CDS GRCh37.p13-Primary Assembly NM_001082619.1 -
+9606 11 111941160 111941425 - NT_033899.8 15503576 15503841 - NP_620144.1 GeneID:120379 CDS GRCh37.p13-Primary Assembly NM_138789.3 -
+9606 11 111941762 111942007 - NT_033899.8 15504178 15504423 - GeneID:120379 CDS GRCh37.p13-Primary Assembly XM_005271403.1 -
+9606 11 111941762 111942007 - NT_033899.8 15504178 15504423 - NP_001076088.1 GeneID:120379 CDS GRCh37.p13-Primary Assembly NM_001082619.1 -
+9606 11 111941762 111942007 - NT_033899.8 15504178 15504423 - NP_620144.1 GeneID:120379 CDS GRCh37.p13-Primary Assembly NM_138789.3 -
+9606 11 111942359 111942482 - NT_033899.8 15504775 15504898 - GeneID:120379 CDS GRCh37.p13-Primary Assembly XM_005271403.1 -
+9606 11 111942359 111942482 - NT_033899.8 15504775 15504898 - NP_001076088.1 GeneID:120379 CDS GRCh37.p13-Primary Assembly NM_001082619.1 -
+9606 11 111942359 111942482 - NT_033899.8 15504775 15504898 - NP_620144.1 GeneID:120379 CDS GRCh37.p13-Primary Assembly NM_138789.3 -
+9606 11 111943722 111943898 - NT_033899.8 15506138 15506314 - GeneID:120379 CDS GRCh37.p13-Primary Assembly XM_005271403.1 -
+9606 11 111943722 111943898 - NT_033899.8 15506138 15506314 - NP_001076088.1 GeneID:120379 CDS GRCh37.p13-Primary Assembly NM_001082619.1 -
+9606 11 111943722 111943898 - NT_033899.8 15506138 15506314 - NP_620144.1 GeneID:120379 CDS GRCh37.p13-Primary Assembly NM_138789.3 -
+9606 11 111943899 111943929 - NT_033899.8 15506315 15506345 - NM_001082619.1 GeneID:120379 UTR GRCh37.p13-Primary Assembly NM_001082619.1 -
+9606 11 111943899 111943929 - NT_033899.8 15506315 15506345 - NM_138789.3 GeneID:120379 UTR GRCh37.p13-Primary Assembly NM_138789.3 -
+9606 11 111943899 111943929 - NT_033899.8 15506315 15506345 - XM_005271403.1 GeneID:120379 UTR GRCh37.p13-Primary Assembly XM_005271403.1 -
+9606 11 111944654 111944704 - NT_033899.8 15507070 15507120 - XM_005271403.1 GeneID:120379 UTR GRCh37.p13-Primary Assembly XM_005271403.1 -
+9606 11 111944704 111944895 - NT_033899.8 15507120 15507311 - NM_001082619.1 GeneID:120379 UTR GRCh37.p13-Primary Assembly NM_001082619.1 -
+9606 11 111944704 111944895 - NT_033899.8 15507120 15507311 - NM_138789.3 GeneID:120379 UTR GRCh37.p13-Primary Assembly NM_138789.3 -
+9606 11 111779350 111779487 - NT_033899.8 15341766 15341903 - NM_001885.1 GeneID:1410 UTR GRCh37.p13-Primary Assembly NM_001885.1 -
+9606 11 111779350 111782473 - NT_033899.8 15341766 15344889 - CRYAB GeneID:1410 GENE GRCh37.p13-Primary Assembly - best RefSeq;identical;N
+9606 11 111779350 111782473 - NT_033899.8 15341766 15344889 - NM_001885.1 GeneID:1410 RNA GRCh37.p13-Primary Assembly NM_001885.1 best RefSeq;identical;N
+9606 11 111779488 111779691 - NT_033899.8 15341904 15342107 - NP_001876.1 GeneID:1410 CDS GRCh37.p13-Primary Assembly NM_001885.1 -
+9606 11 111781051 111781173 - NT_033899.8 15343467 15343589 - NP_001876.1 GeneID:1410 CDS GRCh37.p13-Primary Assembly NM_001885.1 -
+9606 11 111782248 111782448 - NT_033899.8 15344664 15344864 - NP_001876.1 GeneID:1410 CDS GRCh37.p13-Primary Assembly NM_001885.1 -
+9606 11 111782449 111782473 - NT_033899.8 15344865 15344889 - NM_001885.1 GeneID:1410 UTR GRCh37.p13-Primary Assembly NM_001885.1 -
+9606 11 111778793 111779451 + NW_004929381.1 15458222 15458880 + NM_001931.4 GeneID:1737 UTR CHM1_1.1-Primary Assembly NM_001931.4 -
+9606 11 111778793 111818192 + NW_004929381.1 15458222 15497621 + DLAT GeneID:1737 GENE CHM1_1.1-Primary Assembly - best RefSeq;identical;N
+9606 11 111778793 111818192 + NW_004929381.1 15458222 15497621 + NM_001931.4 GeneID:1737 RNA CHM1_1.1-Primary Assembly NM_001931.4 best RefSeq;identical;N
+9606 11 111779452 111779730 + NW_004929381.1 15458881 15459159 + NP_001922.2 GeneID:1737 CDS CHM1_1.1-Primary Assembly NM_001931.4 -
+9606 11 111780177 111780278 + NW_004929381.1 15459606 15459707 + NP_001922.2 GeneID:1737 CDS CHM1_1.1-Primary Assembly NM_001931.4 -
+9606 11 111782494 111782618 + NW_004929381.1 15461923 15462047 + NP_001922.2 GeneID:1737 CDS CHM1_1.1-Primary Assembly NM_001931.4 -
+9606 11 111782771 111782924 + NW_004929381.1 15462200 15462353 + NP_001922.2 GeneID:1737 CDS CHM1_1.1-Primary Assembly NM_001931.4 -
+9606 11 111787360 111787486 + NW_004929381.1 15466789 15466915 + NP_001922.2 GeneID:1737 CDS CHM1_1.1-Primary Assembly NM_001931.4 -
+9606 11 111791173 111791360 + NW_004929381.1 15470602 15470789 + NP_001922.2 GeneID:1737 CDS CHM1_1.1-Primary Assembly NM_001931.4 -
+9606 11 111793144 111793297 + NW_004929381.1 15472573 15472726 + NP_001922.2 GeneID:1737 CDS CHM1_1.1-Primary Assembly NM_001931.4 -
+9606 11 111797366 111797433 + NW_004929381.1 15476795 15476862 + NP_001922.2 GeneID:1737 CDS CHM1_1.1-Primary Assembly NM_001931.4 -
+9606 11 111799039 111799131 + NW_004929381.1 15478468 15478560 + NP_001922.2 GeneID:1737 CDS CHM1_1.1-Primary Assembly NM_001931.4 -
+9606 11 111799763 111799870 + NW_004929381.1 15479192 15479299 + NP_001922.2 GeneID:1737 CDS CHM1_1.1-Primary Assembly NM_001931.4 -
+9606 11 111805134 111805249 + NW_004929381.1 15484563 15484678 + NP_001922.2 GeneID:1737 CDS CHM1_1.1-Primary Assembly NM_001931.4 -
+9606 11 111813799 111813961 + NW_004929381.1 15493228 15493390 + NP_001922.2 GeneID:1737 CDS CHM1_1.1-Primary Assembly NM_001931.4 -
+9606 11 111814952 111815088 + NW_004929381.1 15494381 15494517 + NP_001922.2 GeneID:1737 CDS CHM1_1.1-Primary Assembly NM_001931.4 -
+9606 11 111816320 111816449 + NW_004929381.1 15495749 15495878 + NP_001922.2 GeneID:1737 CDS CHM1_1.1-Primary Assembly NM_001931.4 -
+9606 11 111816450 111818192 + NW_004929381.1 15495879 15497621 + NM_001931.4 GeneID:1737 UTR CHM1_1.1-Primary Assembly NM_001931.4 -
+9606 11 111895538 111896196 + NT_033899.8 15457954 15458612 + NM_001931.4 GeneID:1737 UTR GRCh37.p13-Primary Assembly NM_001931.4 -
+9606 11 111895538 111896237 + NT_033899.8 15457954 15458653 + XM_005271420.1 GeneID:1737 UTR GRCh37.p13-Primary Assembly XM_005271420.1 -
+9606 11 111895538 111933941 + NT_033899.8 15457954 15496357 + XM_005271420.1 GeneID:1737 RNA GRCh37.p13-Primary Assembly XM_005271420.1 mRNA;identical;N
+9606 11 111895538 111935002 + NT_033899.8 15457954 15497418 + DLAT GeneID:1737 GENE GRCh37.p13-Primary Assembly - best RefSeq;identical;N
+9606 11 111895538 111935002 + NT_033899.8 15457954 15497418 + NM_001931.4 GeneID:1737 RNA GRCh37.p13-Primary Assembly NM_001931.4 best RefSeq;identical;N
+9606 11 111895888 111896196 + NT_033899.8 15458304 15458612 + XM_005271421.1 GeneID:1737 UTR GRCh37.p13-Primary Assembly XM_005271421.1 -
+9606 11 111895888 111933941 + NT_033899.8 15458304 15496357 + XM_005271421.1 GeneID:1737 RNA GRCh37.p13-Primary Assembly XM_005271421.1 mRNA;identical;N
+9606 11 111896197 111896475 + NT_033899.8 15458613 15458891 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271421.1 -
+9606 11 111896197 111896475 + NT_033899.8 15458613 15458891 + NP_001922.2 GeneID:1737 CDS GRCh37.p13-Primary Assembly NM_001931.4 -
+9606 11 111896238 111896348 + NT_033899.8 15458654 15458764 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271420.1 -
+9606 11 111896922 111897006 + NT_033899.8 15459338 15459422 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271421.1 -
+9606 11 111896922 111897023 + NT_033899.8 15459338 15459439 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271420.1 -
+9606 11 111896922 111897023 + NT_033899.8 15459338 15459439 + NP_001922.2 GeneID:1737 CDS GRCh37.p13-Primary Assembly NM_001931.4 -
+9606 11 111899239 111899363 + NT_033899.8 15461655 15461779 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271420.1 -
+9606 11 111899239 111899363 + NT_033899.8 15461655 15461779 + NP_001922.2 GeneID:1737 CDS GRCh37.p13-Primary Assembly NM_001931.4 -
+9606 11 111899516 111899669 + NT_033899.8 15461932 15462085 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271420.1 -
+9606 11 111899516 111899669 + NT_033899.8 15461932 15462085 + NP_001922.2 GeneID:1737 CDS GRCh37.p13-Primary Assembly NM_001931.4 -
+9606 11 111904128 111904254 + NT_033899.8 15466544 15466670 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271420.1 -
+9606 11 111904128 111904254 + NT_033899.8 15466544 15466670 + NP_001922.2 GeneID:1737 CDS GRCh37.p13-Primary Assembly NM_001931.4 -
+9606 11 111904213 111904254 + NT_033899.8 15466629 15466670 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271421.1 -
+9606 11 111907997 111908184 + NT_033899.8 15470413 15470600 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271420.1 -
+9606 11 111907997 111908184 + NT_033899.8 15470413 15470600 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271421.1 -
+9606 11 111907997 111908184 + NT_033899.8 15470413 15470600 + NP_001922.2 GeneID:1737 CDS GRCh37.p13-Primary Assembly NM_001931.4 -
+9606 11 111909968 111910121 + NT_033899.8 15472384 15472537 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271420.1 -
+9606 11 111909968 111910121 + NT_033899.8 15472384 15472537 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271421.1 -
+9606 11 111909968 111910121 + NT_033899.8 15472384 15472537 + NP_001922.2 GeneID:1737 CDS GRCh37.p13-Primary Assembly NM_001931.4 -
+9606 11 111914190 111914257 + NT_033899.8 15476606 15476673 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271420.1 -
+9606 11 111914190 111914257 + NT_033899.8 15476606 15476673 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271421.1 -
+9606 11 111914190 111914257 + NT_033899.8 15476606 15476673 + NP_001922.2 GeneID:1737 CDS GRCh37.p13-Primary Assembly NM_001931.4 -
+9606 11 111915862 111915954 + NT_033899.8 15478278 15478370 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271420.1 -
+9606 11 111915862 111915954 + NT_033899.8 15478278 15478370 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271421.1 -
+9606 11 111915862 111915954 + NT_033899.8 15478278 15478370 + NP_001922.2 GeneID:1737 CDS GRCh37.p13-Primary Assembly NM_001931.4 -
+9606 11 111916587 111916694 + NT_033899.8 15479003 15479110 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271420.1 -
+9606 11 111916587 111916694 + NT_033899.8 15479003 15479110 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271421.1 -
+9606 11 111916587 111916694 + NT_033899.8 15479003 15479110 + NP_001922.2 GeneID:1737 CDS GRCh37.p13-Primary Assembly NM_001931.4 -
+9606 11 111921958 111922073 + NT_033899.8 15484374 15484489 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271420.1 -
+9606 11 111921958 111922073 + NT_033899.8 15484374 15484489 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271421.1 -
+9606 11 111921958 111922073 + NT_033899.8 15484374 15484489 + NP_001922.2 GeneID:1737 CDS GRCh37.p13-Primary Assembly NM_001931.4 -
+9606 11 111930627 111930789 + NT_033899.8 15493043 15493205 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271420.1 -
+9606 11 111930627 111930789 + NT_033899.8 15493043 15493205 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271421.1 -
+9606 11 111930627 111930789 + NT_033899.8 15493043 15493205 + NP_001922.2 GeneID:1737 CDS GRCh37.p13-Primary Assembly NM_001931.4 -
+9606 11 111931762 111931898 + NT_033899.8 15494178 15494314 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271420.1 -
+9606 11 111931762 111931898 + NT_033899.8 15494178 15494314 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271421.1 -
+9606 11 111931762 111931898 + NT_033899.8 15494178 15494314 + NP_001922.2 GeneID:1737 CDS GRCh37.p13-Primary Assembly NM_001931.4 -
+9606 11 111933130 111933259 + NT_033899.8 15495546 15495675 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271420.1 -
+9606 11 111933130 111933259 + NT_033899.8 15495546 15495675 + GeneID:1737 CDS GRCh37.p13-Primary Assembly XM_005271421.1 -
+9606 11 111933130 111933259 + NT_033899.8 15495546 15495675 + NP_001922.2 GeneID:1737 CDS GRCh37.p13-Primary Assembly NM_001931.4 -
+9606 11 111933260 111933941 + NT_033899.8 15495676 15496357 + XM_005271420.1 GeneID:1737 UTR GRCh37.p13-Primary Assembly XM_005271420.1 -
+9606 11 111933260 111933941 + NT_033899.8 15495676 15496357 + XM_005271421.1 GeneID:1737 UTR GRCh37.p13-Primary Assembly XM_005271421.1 -
+9606 11 111933260 111935002 + NT_033899.8 15495676 15497418 + NM_001931.4 GeneID:1737 UTR GRCh37.p13-Primary Assembly NM_001931.4 -
+9606 11 111783641 111784373 - NW_004929381.1 15463070 15463802 - PPIHP1 GeneID:246731 GENE CHM1_1.1-Primary Assembly -
+9606 11 111783641 111784373 - NW_004929381.1 15463070 15463802 - PPIHP1 GeneID:246731 PSEUDO CHM1_1.1-Primary Assembly -
+9606 11 111900386 111901118 - NT_033899.8 15462802 15463534 - PPIHP1 GeneID:246731 GENE GRCh37.p13-Primary Assembly -
+9606 11 111900386 111901118 - NT_033899.8 15462802 15463534 - PPIHP1 GeneID:246731 PSEUDO GRCh37.p13-Primary Assembly -
+9606 11 111838702 111839196 - NW_004929381.1 15518131 15518625 - NM_012459.2 GeneID:26521 UTR CHM1_1.1-Primary Assembly NM_012459.2 -
+9606 11 111838702 111839364 - NW_004929381.1 15518131 15518793 - NR_028383.1 GeneID:26521 UTR CHM1_1.1-Primary Assembly NR_028383.1 -
+9606 11 111838702 111840700 - NW_004929381.1 15518131 15520129 - NM_012459.2 GeneID:26521 RNA CHM1_1.1-Primary Assembly NM_012459.2 best RefSeq;identical;N
+9606 11 111838702 111840700 - NW_004929381.1 15518131 15520129 - NR_028383.1 GeneID:26521 RNA CHM1_1.1-Primary Assembly NR_028383.1
+9606 11 111838702 111840700 - NW_004929381.1 15518131 15520129 - TIMM8B GeneID:26521 GENE CHM1_1.1-Primary Assembly - best RefSeq;identical;N
+9606 11 111839197 111839364 - NW_004929381.1 15518626 15518793 - NP_036591.2 GeneID:26521 CDS CHM1_1.1-Primary Assembly NM_012459.2 -
+9606 11 111839880 111840212 - NW_004929381.1 15519309 15519641 - NR_028383.1 GeneID:26521 UTR CHM1_1.1-Primary Assembly NR_028383.1 -
+9606 11 111840542 111840670 - NW_004929381.1 15519971 15520099 - NP_036591.2 GeneID:26521 CDS CHM1_1.1-Primary Assembly NM_012459.2 -
+9606 11 111840542 111840700 - NW_004929381.1 15519971 15520129 - NR_028383.1 GeneID:26521 UTR CHM1_1.1-Primary Assembly NR_028383.1 -
+9606 11 111840671 111840700 - NW_004929381.1 15520100 15520129 - NM_012459.2 GeneID:26521 UTR CHM1_1.1-Primary Assembly NM_012459.2 -
+9606 11 111955524 111956018 - NT_033899.8 15517940 15518434 - NM_012459.2 GeneID:26521 UTR GRCh37.p13-Primary Assembly NM_012459.2 -
+9606 11 111955524 111956180 - NT_033899.8 15517940 15518602 - NR_028383.1 GeneID:26521 UTR GRCh37.p13-Primary Assembly NR_028383.1 -
+9606 11 111955524 111957522 - NT_033899.8 15517940 15519938 - NM_012459.2 GeneID:26521 RNA GRCh37.p13-Primary Assembly NM_012459.2 best RefSeq;identical;N
+9606 11 111955524 111957525 - NT_033899.8 15517940 15519938 - NR_028383.1 GeneID:26521 RNA GRCh37.p13-Primary Assembly NR_028383.1
+9606 11 111955524 111957522 - NT_033899.8 15517940 15519938 - TIMM8B GeneID:26521 GENE GRCh37.p13-Primary Assembly - best RefSeq;identical;N
+9606 11 111956019 111956186 - NT_033899.8 15518435 15518602 - NP_036591.2 GeneID:26521 CDS GRCh37.p13-Primary Assembly NM_012459.2 -
+9606 11 111956700 111957034 - NT_033899.8 15519118 15519450 - NR_028383.1 GeneID:26521 UTR GRCh37.p13-Primary Assembly NR_028383.1 -
+9606 11 111957364 111957492 - NT_033899.8 15519780 15519908 - NP_036591.2 GeneID:26521 CDS GRCh37.p13-Primary Assembly NM_012459.2 -
+9606 11 111957364 111957525 - NT_033899.8 15519780 15519938 - NR_028383.1 GeneID:26521 UTR GRCh37.p13-Primary Assembly NR_028383.1 -
+9606 11 111957493 111957522 - NT_033899.8 15519909 15519938 - NM_012459.2 GeneID:26521 UTR GRCh37.p13-Primary Assembly NM_012459.2 -
+9606 11 112024864 112024899 + NW_004929381.1 15704293 15704328 + XR_252968.1 GeneID:283140 UTR CHM1_1.1-Primary Assembly XR_252968.1 -
+9606 11 112024864 112116989 + NW_004929381.1 15704293 15796418 + LOC283140 GeneID:283140 GENE CHM1_1.1-Primary Assembly -
+9606 11 112024864 112116989 + NW_004929381.1 15704293 15796418 + XR_252968.1 GeneID:283140 RNA CHM1_1.1-Primary Assembly XR_252968.1
+9606 11 112047808 112048010 + NW_004929381.1 15727237 15727439 + XR_252968.1 GeneID:283140 UTR CHM1_1.1-Primary Assembly XR_252968.1 -
+9606 11 112112181 112112225 + NW_004929381.1 15791610 15791654 + XR_252968.1 GeneID:283140 UTR CHM1_1.1-Primary Assembly XR_252968.1 -
+9606 11 112114167 112116989 + NW_004929381.1 15793596 15796418 + XR_252968.1 GeneID:283140 UTR CHM1_1.1-Primary Assembly XR_252968.1 -
+9606 11 111783460 111783553 + NT_033899.8 15345876 15345969 + NM_001541.3 GeneID:3316 UTR GRCh37.p13-Primary Assembly NM_001541.3 -
+9606 11 111783460 111784817 + NT_033899.8 15345876 15347233 + HSPB2 GeneID:3316 GENE GRCh37.p13-Primary Assembly - best RefSeq;identical;N
+9606 11 111783460 111784817 + NT_033899.8 15345876 15347233 + NM_001541.3 GeneID:3316 RNA GRCh37.p13-Primary Assembly NM_001541.3 best RefSeq;identical;N
+9606 11 111783554 111783647 + NT_033899.8 15345970 15346063 + NP_001532.1 GeneID:3316 CDS GRCh37.p13-Primary Assembly NM_001541.3 -
+9606 11 111784165 111784619 + NT_033899.8 15346581 15347035 + NP_001532.1 GeneID:3316 CDS GRCh37.p13-Primary Assembly NM_001541.3 -
+9606 11 111784620 111784817 + NT_033899.8 15347036 15347233 + NM_001541.3 GeneID:3316 UTR GRCh37.p13-Primary Assembly NM_001541.3 -
+9606 11 111962773 111963074 + NW_004929381.1 15642202 15642503 + MRPS36P4 GeneID:347702 GENE CHM1_1.1-Primary Assembly -
+9606 11 111962773 111963074 + NW_004929381.1 15642202 15642503 + MRPS36P4 GeneID:347702 PSEUDO CHM1_1.1-Primary Assembly -
+9606 11 112079320 112079621 + NT_033899.8 15641736 15642037 + MRPS36P4 GeneID:347702 GENE GRCh37.p13-Primary Assembly -
+9606 11 112079320 112079621 + NT_033899.8 15641736 15642037 + MRPS36P4 GeneID:347702 PSEUDO GRCh37.p13-Primary Assembly -
+9606 11 112002334 112002979 - NW_004929381.1 15681763 15682408 - NM_001145024.1 GeneID:349633 UTR CHM1_1.1-Primary Assembly NM_001145024.1 -
+9606 11 112002334 112014980 - NW_004929381.1 15681763 15694409 - NM_001145024.1 GeneID:349633 RNA CHM1_1.1-Primary Assembly NM_001145024.1 best RefSeq;mismatch;N
+9606 11 112002334 112014980 - NW_004929381.1 15681763 15694409 - PLET1 GeneID:349633 GENE CHM1_1.1-Primary Assembly - best RefSeq;mismatch;N
+9606 11 112002980 112003155 - NW_004929381.1 15682409 15682584 - NP_001138496.1 GeneID:349633 CDS CHM1_1.1-Primary Assembly NM_001145024.1 -
+9606 11 112006512 112006573 - NW_004929381.1 15685941 15686002 - NP_001138496.1 GeneID:349633 CDS CHM1_1.1-Primary Assembly NM_001145024.1 -
+9606 11 112009507 112009708 - NW_004929381.1 15688936 15689137 - NP_001138496.1 GeneID:349633 CDS CHM1_1.1-Primary Assembly NM_001145024.1 -
+9606 11 112014526 112014709 - NW_004929381.1 15693955 15694138 - NP_001138496.1 GeneID:349633 CDS CHM1_1.1-Primary Assembly NM_001145024.1 -
+9606 11 112014710 112014980 - NW_004929381.1 15694139 15694409 - NM_001145024.1 GeneID:349633 UTR CHM1_1.1-Primary Assembly NM_001145024.1 -
+9606 11 112118876 112119521 - NT_033899.8 15681292 15681937 - NM_001145024.1 GeneID:349633 UTR GRCh37.p13-Primary Assembly NM_001145024.1 -
+9606 11 112118876 112131583 - NT_033899.8 15681292 15693999 - NM_001145024.1 GeneID:349633 RNA GRCh37.p13-Primary Assembly NM_001145024.1 best RefSeq;identical;N
+9606 11 112118876 112131583 - NT_033899.8 15681292 15693999 - PLET1 GeneID:349633 GENE GRCh37.p13-Primary Assembly - best RefSeq;identical;N
+9606 11 112119522 112119697 - NT_033899.8 15681938 15682113 - NP_001138496.1 GeneID:349633 CDS GRCh37.p13-Primary Assembly NM_001145024.1 -
+9606 11 112123071 112123132 - NT_033899.8 15685487 15685548 - NP_001138496.1 GeneID:349633 CDS GRCh37.p13-Primary Assembly NM_001145024.1 -
+9606 11 112126111 112126312 - NT_033899.8 15688527 15688728 - NP_001138496.1 GeneID:349633 CDS GRCh37.p13-Primary Assembly NM_001145024.1 -
+9606 11 112131129 112131312 - NT_033899.8 15693545 15693728 - NP_001138496.1 GeneID:349633 CDS GRCh37.p13-Primary Assembly NM_001145024.1 -
+9606 11 112131313 112131583 - NT_033899.8 15693729 15693999 - NM_001145024.1 GeneID:349633 UTR GRCh37.p13-Primary Assembly NM_001145024.1 -
+9606 11 111897441 111897785 - NW_004929381.1 15576870 15577214 - NM_001243211.1 GeneID:3606 UTR CHM1_1.1-Primary Assembly NM_001243211.1 -
+9606 11 111897441 111897785 - NW_004929381.1 15576870 15577214 - NM_001562.3 GeneID:3606 UTR CHM1_1.1-Primary Assembly NM_001562.3 -
+9606 11 111897441 111918303 - NW_004929381.1 15576870 15597732 - IL18 GeneID:3606 GENE CHM1_1.1-Primary Assembly - best RefSeq;identical;N
+9606 11 111897441 111918303 - NW_004929381.1 15576870 15597732 - NM_001243211.1 GeneID:3606 RNA CHM1_1.1-Primary Assembly NM_001243211.1 best RefSeq;identical;N
+9606 11 111897441 111918303 - NW_004929381.1 15576870 15597732 - NM_001562.3 GeneID:3606 RNA CHM1_1.1-Primary Assembly NM_001562.3 best RefSeq;identical;N
+9606 11 111897786 111898007 - NW_004929381.1 15577215 15577436 - NP_001230140.1 GeneID:3606 CDS CHM1_1.1-Primary Assembly NM_001243211.1 -
+9606 11 111897786 111898007 - NW_004929381.1 15577215 15577436 - NP_001553.1 GeneID:3606 CDS CHM1_1.1-Primary Assembly NM_001562.3 -
+9606 11 111902782 111902915 - NW_004929381.1 15582211 15582344 - NP_001230140.1 GeneID:3606 CDS CHM1_1.1-Primary Assembly NM_001243211.1 -
+9606 11 111902782 111902915 - NW_004929381.1 15582211 15582344 - NP_001553.1 GeneID:3606 CDS CHM1_1.1-Primary Assembly NM_001562.3 -
+9606 11 111904254 111904388 - NW_004929381.1 15583683 15583817 - NP_001230140.1 GeneID:3606 CDS CHM1_1.1-Primary Assembly NM_001243211.1 -
+9606 11 111904254 111904388 - NW_004929381.1 15583683 15583817 - NP_001553.1 GeneID:3606 CDS CHM1_1.1-Primary Assembly NM_001562.3 -
+9606 11 111907773 111907784 - NW_004929381.1 15587202 15587213 - NP_001553.1 GeneID:3606 CDS CHM1_1.1-Primary Assembly NM_001562.3 -
+9606 11 111909156 111909234 - NW_004929381.1 15588585 15588663 - NP_001230140.1 GeneID:3606 CDS CHM1_1.1-Primary Assembly NM_001243211.1 -
+9606 11 111909156 111909234 - NW_004929381.1 15588585 15588663 - NP_001553.1 GeneID:3606 CDS CHM1_1.1-Primary Assembly NM_001562.3 -
+9606 11 111909235 111909242 - NW_004929381.1 15588664 15588671 - NM_001243211.1 GeneID:3606 UTR CHM1_1.1-Primary Assembly NM_001243211.1 -
+9606 11 111909235 111909242 - NW_004929381.1 15588664 15588671 - NM_001562.3 GeneID:3606 UTR CHM1_1.1-Primary Assembly NM_001562.3 -
+9606 11 111918092 111918303 - NW_004929381.1 15597521 15597732 - NM_001243211.1 GeneID:3606 UTR CHM1_1.1-Primary Assembly NM_001243211.1 -
+9606 11 111918092 111918303 - NW_004929381.1 15597521 15597732 - NM_001562.3 GeneID:3606 UTR CHM1_1.1-Primary Assembly NM_001562.3 -
+9606 11 112013974 112014318 - NT_033899.8 15576390 15576734 - NM_001243211.1 GeneID:3606 UTR GRCh37.p13-Primary Assembly NM_001243211.1 -
+9606 11 112013974 112014318 - NT_033899.8 15576390 15576734 - NM_001562.3 GeneID:3606 UTR GRCh37.p13-Primary Assembly NM_001562.3 -
+9606 11 112013974 112034840 - NT_033899.8 15576390 15597256 - IL18 GeneID:3606 GENE GRCh37.p13-Primary Assembly - best RefSeq;identical;N
+9606 11 112013974 112034840 - NT_033899.8 15576390 15597256 - NM_001243211.1 GeneID:3606 RNA GRCh37.p13-Primary Assembly NM_001243211.1 best RefSeq;identical;N
+9606 11 112013974 112034840 - NT_033899.8 15576390 15597256 - NM_001562.3 GeneID:3606 RNA GRCh37.p13-Primary Assembly NM_001562.3 best RefSeq;identical;N
+9606 11 112014319 112014540 - NT_033899.8 15576735 15576956 - NP_001230140.1 GeneID:3606 CDS GRCh37.p13-Primary Assembly NM_001243211.1 -
+9606 11 112014319 112014540 - NT_033899.8 15576735 15576956 - NP_001553.1 GeneID:3606 CDS GRCh37.p13-Primary Assembly NM_001562.3 -
+9606 11 112019326 112019459 - NT_033899.8 15581742 15581875 - NP_001230140.1 GeneID:3606 CDS GRCh37.p13-Primary Assembly NM_001243211.1 -
+9606 11 112019326 112019459 - NT_033899.8 15581742 15581875 - NP_001553.1 GeneID:3606 CDS GRCh37.p13-Primary Assembly NM_001562.3 -
+9606 11 112020795 112020929 - NT_033899.8 15583211 15583345 - NP_001230140.1 GeneID:3606 CDS GRCh37.p13-Primary Assembly NM_001243211.1 -
+9606 11 112020795 112020929 - NT_033899.8 15583211 15583345 - NP_001553.1 GeneID:3606 CDS GRCh37.p13-Primary Assembly NM_001562.3 -
+9606 11 112024315 112024326 - NT_033899.8 15586731 15586742 - NP_001553.1 GeneID:3606 CDS GRCh37.p13-Primary Assembly NM_001562.3 -
+9606 11 112025698 112025776 - NT_033899.8 15588114 15588192 - NP_001230140.1 GeneID:3606 CDS GRCh37.p13-Primary Assembly NM_001243211.1 -
+9606 11 112025698 112025776 - NT_033899.8 15588114 15588192 - NP_001553.1 GeneID:3606 CDS GRCh37.p13-Primary Assembly NM_001562.3 -
+9606 11 112025777 112025784 - NT_033899.8 15588193 15588200 - NM_001243211.1 GeneID:3606 UTR GRCh37.p13-Primary Assembly NM_001243211.1 -
+9606 11 112025777 112025784 - NT_033899.8 15588193 15588200 - NM_001562.3 GeneID:3606 UTR GRCh37.p13-Primary Assembly NM_001562.3 -
+9606 11 112034629 112034840 - NT_033899.8 15597045 15597256 - NM_001243211.1 GeneID:3606 UTR GRCh37.p13-Primary Assembly NM_001243211.1 -
+9606 11 112034629 112034840 - NT_033899.8 15597045 15597256 - NM_001562.3 GeneID:3606 UTR GRCh37.p13-Primary Assembly NM_001562.3 -
+9606 11 112021411 112022491 - NW_004929381.1 15700840 15701920 - ST13P10 GeneID:399950 GENE CHM1_1.1-Primary Assembly -
+9606 11 112021411 112022491 - NW_004929381.1 15700840 15701920 - ST13P10 GeneID:399950 PSEUDO CHM1_1.1-Primary Assembly -
+9606 11 112138019 112139094 - NT_033899.8 15700435 15701510 - ST13P10 GeneID:399950 GENE GRCh37.p13-Primary Assembly -
+9606 11 112138019 112139094 - NT_033899.8 15700435 15701510 - ST13P10 GeneID:399950 PSEUDO GRCh37.p13-Primary Assembly -
+9606 11 111828147 111828261 + NW_004929381.1 15507576 15507690 + NM_001082969.1 GeneID:55216 UTR CHM1_1.1-Primary Assembly NM_001082969.1 -
+9606 11 111828147 111828819 + NW_004929381.1 15507576 15508248 + NM_001082970.1 GeneID:55216 UTR CHM1_1.1-Primary Assembly NM_001082970.1 -
+9606 11 111828147 111828819 + NW_004929381.1 15507576 15508248 + NM_018195.3 GeneID:55216 UTR CHM1_1.1-Primary Assembly NM_018195.3 -
+9606 11 111828147 111828819 + NW_004929381.1 15507576 15508248 + NR_103469.1 GeneID:55216 UTR CHM1_1.1-Primary Assembly NR_103469.1 -
+9606 11 111828147 111839052 + NW_004929381.1 15507576 15518481 + C11orf57 GeneID:55216 GENE CHM1_1.1-Primary Assembly - best RefSeq;identical;N
+9606 11 111828147 111839052 + NW_004929381.1 15507576 15518481 + NM_001082969.1 GeneID:55216 RNA CHM1_1.1-Primary Assembly NM_001082969.1 best RefSeq;identical;N
+9606 11 111828147 111839052 + NW_004929381.1 15507576 15518481 + NM_001082970.1 GeneID:55216 RNA CHM1_1.1-Primary Assembly NM_001082970.1 best RefSeq;identical;N
+9606 11 111828147 111839052 + NW_004929381.1 15507576 15518481 + NM_018195.3 GeneID:55216 RNA CHM1_1.1-Primary Assembly NM_018195.3 best RefSeq;identical;N
+9606 11 111828147 111839052 + NW_004929381.1 15507576 15518481 + NR_103469.1 GeneID:55216 RNA CHM1_1.1-Primary Assembly NR_103469.1
+9606 11 111829470 111829477 + NW_004929381.1 15508899 15508906 + NM_001082969.1 GeneID:55216 UTR CHM1_1.1-Primary Assembly NM_001082969.1 -
+9606 11 111829470 111829477 + NW_004929381.1 15508899 15508906 + NM_001082970.1 GeneID:55216 UTR CHM1_1.1-Primary Assembly NM_001082970.1 -
+9606 11 111829470 111829477 + NW_004929381.1 15508899 15508906 + NM_018195.3 GeneID:55216 UTR CHM1_1.1-Primary Assembly NM_018195.3 -
+9606 11 111829470 111829587 + NW_004929381.1 15508899 15509016 + NR_103469.1 GeneID:55216 UTR CHM1_1.1-Primary Assembly NR_103469.1 -
+9606 11 111829478 111829546 + NW_004929381.1 15508907 15508975 + NP_001076438.1 GeneID:55216 CDS CHM1_1.1-Primary Assembly NM_001082969.1 -
+9606 11 111829478 111829546 + NW_004929381.1 15508907 15508975 + NP_001076439.1 GeneID:55216 CDS CHM1_1.1-Primary Assembly NM_001082970.1 -
+9606 11 111829478 111829546 + NW_004929381.1 15508907 15508975 + NP_060665.3 GeneID:55216 CDS CHM1_1.1-Primary Assembly NM_018195.3 -
+9606 11 111832118 111832218 + NW_004929381.1 15511547 15511647 + NP_001076438.1 GeneID:55216 CDS CHM1_1.1-Primary Assembly NM_001082969.1 -
+9606 11 111832118 111832218 + NW_004929381.1 15511547 15511647 + NP_001076439.1 GeneID:55216 CDS CHM1_1.1-Primary Assembly NM_001082970.1 -
+9606 11 111832118 111832218 + NW_004929381.1 15511547 15511647 + NP_060665.3 GeneID:55216 CDS CHM1_1.1-Primary Assembly NM_018195.3 -
+9606 11 111832118 111832218 + NW_004929381.1 15511547 15511647 + NR_103469.1 GeneID:55216 UTR CHM1_1.1-Primary Assembly NR_103469.1 -
+9606 11 111834312 111834461 + NW_004929381.1 15513741 15513890 + NP_001076438.1 GeneID:55216 CDS CHM1_1.1-Primary Assembly NM_001082969.1 -
+9606 11 111834312 111834461 + NW_004929381.1 15513741 15513890 + NP_001076439.1 GeneID:55216 CDS CHM1_1.1-Primary Assembly NM_001082970.1 -
+9606 11 111834312 111834461 + NW_004929381.1 15513741 15513890 + NP_060665.3 GeneID:55216 CDS CHM1_1.1-Primary Assembly NM_018195.3 -
+9606 11 111834312 111834461 + NW_004929381.1 15513741 15513890 + NR_103469.1 GeneID:55216 UTR CHM1_1.1-Primary Assembly NR_103469.1 -
+9606 11 111835885 111835938 + NW_004929381.1 15515314 15515367 + NP_001076438.1 GeneID:55216 CDS CHM1_1.1-Primary Assembly NM_001082969.1 -
+9606 11 111835885 111835938 + NW_004929381.1 15515314 15515367 + NP_001076439.1 GeneID:55216 CDS CHM1_1.1-Primary Assembly NM_001082970.1 -
+9606 11 111835885 111835938 + NW_004929381.1 15515314 15515367 + NP_060665.3 GeneID:55216 CDS CHM1_1.1-Primary Assembly NM_018195.3 -
+9606 11 111835885 111835938 + NW_004929381.1 15515314 15515367 + NR_103469.1 GeneID:55216 UTR CHM1_1.1-Primary Assembly NR_103469.1 -
+9606 11 111836368 111836875 + NW_004929381.1 15515797 15516304 + NP_001076438.1 GeneID:55216 CDS CHM1_1.1-Primary Assembly NM_001082969.1 -
+9606 11 111836368 111836875 + NW_004929381.1 15515797 15516304 + NP_060665.3 GeneID:55216 CDS CHM1_1.1-Primary Assembly NM_018195.3 -
+9606 11 111836368 111839052 + NW_004929381.1 15515797 15518481 + NR_103469.1 GeneID:55216 UTR CHM1_1.1-Primary Assembly NR_103469.1 -
+9606 11 111836371 111836875 + NW_004929381.1 15515800 15516304 + NP_001076439.1 GeneID:55216 CDS CHM1_1.1-Primary Assembly NM_001082970.1 -
+9606 11 111836876 111839052 + NW_004929381.1 15516305 15518481 + NM_001082969.1 GeneID:55216 UTR CHM1_1.1-Primary Assembly NM_001082969.1 -
+9606 11 111836876 111839052 + NW_004929381.1 15516305 15518481 + NM_001082970.1 GeneID:55216 UTR CHM1_1.1-Primary Assembly NM_001082970.1 -
+9606 11 111836876 111839052 + NW_004929381.1 15516305 15518481 + NM_018195.3 GeneID:55216 UTR CHM1_1.1-Primary Assembly NM_018195.3 -
+9606 11 111944968 111945082 + NT_033899.8 15507384 15507498 + NM_001082969.1 GeneID:55216 UTR GRCh37.p13-Primary Assembly NM_001082969.1 -
+9606 11 111944968 111945640 + NT_033899.8 15507384 15508056 + NM_001082970.1 GeneID:55216 UTR GRCh37.p13-Primary Assembly NM_001082970.1 -
+9606 11 111944968 111945640 + NT_033899.8 15507384 15508056 + NM_018195.3 GeneID:55216 UTR GRCh37.p13-Primary Assembly NM_018195.3 -
+9606 11 111944968 111945640 + NT_033899.8 15507384 15508056 + NR_103469.1 GeneID:55216 UTR GRCh37.p13-Primary Assembly NR_103469.1 -
+9606 11 111944968 111955874 + NT_033899.8 15507384 15518290 + C11orf57 GeneID:55216 GENE GRCh37.p13-Primary Assembly - best RefSeq;identical;N
+9606 11 111944968 111955874 + NT_033899.8 15507384 15518290 + NM_001082969.1 GeneID:55216 RNA GRCh37.p13-Primary Assembly NM_001082969.1 best RefSeq;identical;N
+9606 11 111944968 111955874 + NT_033899.8 15507384 15518290 + NM_001082970.1 GeneID:55216 RNA GRCh37.p13-Primary Assembly NM_001082970.1 best RefSeq;identical;N
+9606 11 111944968 111955874 + NT_033899.8 15507384 15518290 + NM_018195.3 GeneID:55216 RNA GRCh37.p13-Primary Assembly NM_018195.3 best RefSeq;identical;N
+9606 11 111944968 111955874 + NT_033899.8 15507384 15518290 + NR_103469.1 GeneID:55216 RNA GRCh37.p13-Primary Assembly NR_103469.1
+9606 11 111946291 111946298 + NT_033899.8 15508707 15508714 + NM_001082969.1 GeneID:55216 UTR GRCh37.p13-Primary Assembly NM_001082969.1 -
+9606 11 111946291 111946298 + NT_033899.8 15508707 15508714 + NM_001082970.1 GeneID:55216 UTR GRCh37.p13-Primary Assembly NM_001082970.1 -
+9606 11 111946291 111946298 + NT_033899.8 15508707 15508714 + NM_018195.3 GeneID:55216 UTR GRCh37.p13-Primary Assembly NM_018195.3 -
+9606 11 111946291 111946408 + NT_033899.8 15508707 15508824 + NR_103469.1 GeneID:55216 UTR GRCh37.p13-Primary Assembly NR_103469.1 -
+9606 11 111946299 111946367 + NT_033899.8 15508715 15508783 + NP_001076438.1 GeneID:55216 CDS GRCh37.p13-Primary Assembly NM_001082969.1 -
+9606 11 111946299 111946367 + NT_033899.8 15508715 15508783 + NP_001076439.1 GeneID:55216 CDS GRCh37.p13-Primary Assembly NM_001082970.1 -
+9606 11 111946299 111946367 + NT_033899.8 15508715 15508783 + NP_060665.3 GeneID:55216 CDS GRCh37.p13-Primary Assembly NM_018195.3 -
+9606 11 111948939 111949039 + NT_033899.8 15511355 15511455 + NP_001076438.1 GeneID:55216 CDS GRCh37.p13-Primary Assembly NM_001082969.1 -
+9606 11 111948939 111949039 + NT_033899.8 15511355 15511455 + NP_001076439.1 GeneID:55216 CDS GRCh37.p13-Primary Assembly NM_001082970.1 -
+9606 11 111948939 111949039 + NT_033899.8 15511355 15511455 + NP_060665.3 GeneID:55216 CDS GRCh37.p13-Primary Assembly NM_018195.3 -
+9606 11 111948939 111949039 + NT_033899.8 15511355 15511455 + NR_103469.1 GeneID:55216 UTR GRCh37.p13-Primary Assembly NR_103469.1 -
+9606 11 111951133 111951282 + NT_033899.8 15513549 15513698 + NP_001076438.1 GeneID:55216 CDS GRCh37.p13-Primary Assembly NM_001082969.1 -
+9606 11 111951133 111951282 + NT_033899.8 15513549 15513698 + NP_001076439.1 GeneID:55216 CDS GRCh37.p13-Primary Assembly NM_001082970.1 -
+9606 11 111951133 111951282 + NT_033899.8 15513549 15513698 + NP_060665.3 GeneID:55216 CDS GRCh37.p13-Primary Assembly NM_018195.3 -
+9606 11 111951133 111951282 + NT_033899.8 15513549 15513698 + NR_103469.1 GeneID:55216 UTR GRCh37.p13-Primary Assembly NR_103469.1 -
+9606 11 111952706 111952759 + NT_033899.8 15515122 15515175 + NP_001076438.1 GeneID:55216 CDS GRCh37.p13-Primary Assembly NM_001082969.1 -
+9606 11 111952706 111952759 + NT_033899.8 15515122 15515175 + NP_001076439.1 GeneID:55216 CDS GRCh37.p13-Primary Assembly NM_001082970.1 -
+9606 11 111952706 111952759 + NT_033899.8 15515122 15515175 + NP_060665.3 GeneID:55216 CDS GRCh37.p13-Primary Assembly NM_018195.3 -
+9606 11 111952706 111952759 + NT_033899.8 15515122 15515175 + NR_103469.1 GeneID:55216 UTR GRCh37.p13-Primary Assembly NR_103469.1 -
+9606 11 111953189 111953696 + NT_033899.8 15515605 15516112 + NP_001076438.1 GeneID:55216 CDS GRCh37.p13-Primary Assembly NM_001082969.1 -
+9606 11 111953189 111953696 + NT_033899.8 15515605 15516112 + NP_060665.3 GeneID:55216 CDS GRCh37.p13-Primary Assembly NM_018195.3 -
+9606 11 111953189 111955874 + NT_033899.8 15515605 15518290 + NR_103469.1 GeneID:55216 UTR GRCh37.p13-Primary Assembly NR_103469.1 -
+9606 11 111953192 111953696 + NT_033899.8 15515608 15516112 + NP_001076439.1 GeneID:55216 CDS GRCh37.p13-Primary Assembly NM_001082970.1 -
+9606 11 111953697 111955874 + NT_033899.8 15516113 15518290 + NM_001082969.1 GeneID:55216 UTR GRCh37.p13-Primary Assembly NM_001082969.1 -
+9606 11 111953697 111955874 + NT_033899.8 15516113 15518290 + NM_001082970.1 GeneID:55216 UTR GRCh37.p13-Primary Assembly NM_001082970.1 -
+9606 11 111953697 111955874 + NT_033899.8 15516113 15518290 + NM_018195.3 GeneID:55216 UTR GRCh37.p13-Primary Assembly NM_018195.3 -
+9606 11 111921558 111921673 + NW_004929381.1 15600987 15601102 + NM_031275.4 GeneID:56158 UTR CHM1_1.1-Primary Assembly NM_031275.4 -
+9606 11 111921558 111926733 + NW_004929381.1 15600987 15606162 + NM_031275.4 GeneID:56158 RNA CHM1_1.1-Primary Assembly NM_031275.4 best RefSeq;identical;N
+9606 11 111921558 111926733 + NW_004929381.1 15600987 15606162 + TEX12 GeneID:56158 GENE CHM1_1.1-Primary Assembly - best RefSeq;identical;N
+9606 11 111923439 111923454 + NW_004929381.1 15602868 15602883 + NM_031275.4 GeneID:56158 UTR CHM1_1.1-Primary Assembly NM_031275.4 -
+9606 11 111923455 111923517 + NW_004929381.1 15602884 15602946 + NP_112565.1 GeneID:56158 CDS CHM1_1.1-Primary Assembly NM_031275.4 -
+9606 11 111924596 111924707 + NW_004929381.1 15604025 15604136 + NP_112565.1 GeneID:56158 CDS CHM1_1.1-Primary Assembly NM_031275.4 -
+9606 11 111924800 111924851 + NW_004929381.1 15604229 15604280 + NP_112565.1 GeneID:56158 CDS CHM1_1.1-Primary Assembly NM_031275.4 -
+9606 11 111925949 111926093 + NW_004929381.1 15605378 15605522 + NP_112565.1 GeneID:56158 CDS CHM1_1.1-Primary Assembly NM_031275.4 -
+9606 11 111926094 111926733 + NW_004929381.1 15605523 15606162 + NM_031275.4 GeneID:56158 UTR CHM1_1.1-Primary Assembly NM_031275.4 -
+9606 11 112004926 112005077 + NT_033899.8 15567342 15567493 + XM_005271612.1 GeneID:56158 UTR GRCh37.p13-Primary Assembly XM_005271612.1 -
+9606 11 112004926 112043279 + NT_033899.8 15567342 15605695 + TEX12 GeneID:56158 GENE GRCh37.p13-Primary Assembly - best RefSeq;identical;N
+9606 11 112004926 112043279 + NT_033899.8 15567342 15605695 + XM_005271612.1 GeneID:56158 RNA GRCh37.p13-Primary Assembly XM_005271612.1 mRNA;identical;N
+9606 11 112037998 112038137 + NT_033899.8 15600414 15600553 + XM_005271611.1 GeneID:56158 UTR GRCh37.p13-Primary Assembly XM_005271611.1 -
+9606 11 112037998 112043279 + NT_033899.8 15600414 15605695 + XM_005271611.1 GeneID:56158 RNA GRCh37.p13-Primary Assembly XM_005271611.1 mRNA;identical;N
+9606 11 112038095 112038210 + NT_033899.8 15600511 15600626 + NM_031275.4 GeneID:56158 UTR GRCh37.p13-Primary Assembly NM_031275.4 -
+9606 11 112038095 112043279 + NT_033899.8 15600511 15605695 + NM_031275.4 GeneID:56158 RNA GRCh37.p13-Primary Assembly NM_031275.4 best RefSeq;identical;N
+9606 11 112039968 112039991 + NT_033899.8 15602384 15602407 + XM_005271611.1 GeneID:56158 UTR GRCh37.p13-Primary Assembly XM_005271611.1 -
+9606 11 112039968 112039991 + NT_033899.8 15602384 15602407 + XM_005271612.1 GeneID:56158 UTR GRCh37.p13-Primary Assembly XM_005271612.1 -
+9606 11 112039976 112039991 + NT_033899.8 15602392 15602407 + NM_031275.4 GeneID:56158 UTR GRCh37.p13-Primary Assembly NM_031275.4 -
+9606 11 112039992 112040054 + NT_033899.8 15602408 15602470 + GeneID:56158 CDS GRCh37.p13-Primary Assembly XM_005271611.1 -
+9606 11 112039992 112040054 + NT_033899.8 15602408 15602470 + GeneID:56158 CDS GRCh37.p13-Primary Assembly XM_005271612.1 -
+9606 11 112039992 112040054 + NT_033899.8 15602408 15602470 + NP_112565.1 GeneID:56158 CDS GRCh37.p13-Primary Assembly NM_031275.4 -
+9606 11 112041142 112041253 + NT_033899.8 15603558 15603669 + GeneID:56158 CDS GRCh37.p13-Primary Assembly XM_005271611.1 -
+9606 11 112041142 112041253 + NT_033899.8 15603558 15603669 + GeneID:56158 CDS GRCh37.p13-Primary Assembly XM_005271612.1 -
+9606 11 112041142 112041253 + NT_033899.8 15603558 15603669 + NP_112565.1 GeneID:56158 CDS GRCh37.p13-Primary Assembly NM_031275.4 -
+9606 11 112041346 112041397 + NT_033899.8 15603762 15603813 + GeneID:56158 CDS GRCh37.p13-Primary Assembly XM_005271611.1 -
+9606 11 112041346 112041397 + NT_033899.8 15603762 15603813 + GeneID:56158 CDS GRCh37.p13-Primary Assembly XM_005271612.1 -
+9606 11 112041346 112041397 + NT_033899.8 15603762 15603813 + NP_112565.1 GeneID:56158 CDS GRCh37.p13-Primary Assembly NM_031275.4 -
+9606 11 112042495 112042639 + NT_033899.8 15604911 15605055 + GeneID:56158 CDS GRCh37.p13-Primary Assembly XM_005271611.1 -
+9606 11 112042495 112042639 + NT_033899.8 15604911 15605055 + GeneID:56158 CDS GRCh37.p13-Primary Assembly XM_005271612.1 -
+9606 11 112042495 112042639 + NT_033899.8 15604911 15605055 + NP_112565.1 GeneID:56158 CDS GRCh37.p13-Primary Assembly NM_031275.4 -
+9606 11 112042640 112043279 + NT_033899.8 15605056 15605695 + NM_031275.4 GeneID:56158 UTR GRCh37.p13-Primary Assembly NM_031275.4 -
+9606 11 112042640 112043279 + NT_033899.8 15605056 15605695 + XM_005271611.1 GeneID:56158 UTR GRCh37.p13-Primary Assembly XM_005271611.1 -
+9606 11 112042640 112043279 + NT_033899.8 15605056 15605695 + XM_005271612.1 GeneID:56158 UTR GRCh37.p13-Primary Assembly XM_005271612.1 -
+9606 11 111980551 111980629 + NW_004929381.1 15659980 15660058 + NM_000317.2 GeneID:5805 UTR CHM1_1.1-Primary Assembly NM_000317.2 -
+9606 11 111980551 111988158 + NW_004929381.1 15659980 15667587 + NM_000317.2 GeneID:5805 RNA CHM1_1.1-Primary Assembly NM_000317.2 best RefSeq;identical;N
+9606 11 111980551 111988158 + NW_004929381.1 15659980 15667587 + PTS GeneID:5805 GENE CHM1_1.1-Primary Assembly - best RefSeq;identical;N
+9606 11 111980630 111980712 + NW_004929381.1 15660059 15660141 + NP_000308.1 GeneID:5805 CDS CHM1_1.1-Primary Assembly NM_000317.2 -
+9606 11 111982779 111982858 + NW_004929381.1 15662208 15662287 + NP_000308.1 GeneID:5805 CDS CHM1_1.1-Primary Assembly NM_000317.2 -
+9606 11 111984393 111984415 + NW_004929381.1 15663822 15663844 + NP_000308.1 GeneID:5805 CDS CHM1_1.1-Primary Assembly NM_000317.2 -
+9606 11 111984811 111984867 + NW_004929381.1 15664240 15664296 + NP_000308.1 GeneID:5805 CDS CHM1_1.1-Primary Assembly NM_000317.2 -
+9606 11 111987348 111987418 + NW_004929381.1 15666777 15666847 + NP_000308.1 GeneID:5805 CDS CHM1_1.1-Primary Assembly NM_000317.2 -
+9606 11 111987617 111987740 + NW_004929381.1 15667046 15667169 + NP_000308.1 GeneID:5805 CDS CHM1_1.1-Primary Assembly NM_000317.2 -
+9606 11 111987741 111988158 + NW_004929381.1 15667170 15667587 + NM_000317.2 GeneID:5805 UTR CHM1_1.1-Primary Assembly NM_000317.2 -
+9606 11 112097088 112097166 + NT_033899.8 15659504 15659582 + NM_000317.2 GeneID:5805 UTR GRCh37.p13-Primary Assembly NM_000317.2 -
+9606 11 112097088 112104696 + NT_033899.8 15659504 15667112 + NM_000317.2 GeneID:5805 RNA GRCh37.p13-Primary Assembly NM_000317.2 best RefSeq;identical;N
+9606 11 112097088 112104696 + NT_033899.8 15659504 15667112 + PTS GeneID:5805 GENE GRCh37.p13-Primary Assembly - best RefSeq;identical;N
+9606 11 112097167 112097249 + NT_033899.8 15659583 15659665 + NP_000308.1 GeneID:5805 CDS GRCh37.p13-Primary Assembly NM_000317.2 -
+9606 11 112099317 112099396 + NT_033899.8 15661733 15661812 + NP_000308.1 GeneID:5805 CDS GRCh37.p13-Primary Assembly NM_000317.2 -
+9606 11 112100931 112100953 + NT_033899.8 15663347 15663369 + NP_000308.1 GeneID:5805 CDS GRCh37.p13-Primary Assembly NM_000317.2 -
+9606 11 112101349 112101405 + NT_033899.8 15663765 15663821 + NP_000308.1 GeneID:5805 CDS GRCh37.p13-Primary Assembly NM_000317.2 -
+9606 11 112103886 112103956 + NT_033899.8 15666302 15666372 + NP_000308.1 GeneID:5805 CDS GRCh37.p13-Primary Assembly NM_000317.2 -
+9606 11 112104155 112104278 + NT_033899.8 15666571 15666694 + NP_000308.1 GeneID:5805 CDS GRCh37.p13-Primary Assembly NM_000317.2 -
+9606 11 112104279 112104696 + NT_033899.8 15666695 15667112 + NM_000317.2 GeneID:5805 UTR GRCh37.p13-Primary Assembly NM_000317.2 -
+9606 11 111840726 111840809 + NW_004929381.1 15520155 15520238 + NM_001276503.1 GeneID:6392 UTR CHM1_1.1-Primary Assembly NM_001276503.1 -
+9606 11 111840726 111840809 + NW_004929381.1 15520155 15520238 + NM_001276504.1 GeneID:6392 UTR CHM1_1.1-Primary Assembly NM_001276504.1 -
+9606 11 111840726 111840809 + NW_004929381.1 15520155 15520238 + NM_001276506.1 GeneID:6392 UTR CHM1_1.1-Primary Assembly NM_001276506.1 -
+9606 11 111840726 111840809 + NW_004929381.1 15520155 15520238 + NM_003002.3 GeneID:6392 UTR CHM1_1.1-Primary Assembly NM_003002.3 -
+9606 11 111840726 111840861 + NW_004929381.1 15520155 15520290 + NR_077060.1 GeneID:6392 UTR CHM1_1.1-Primary Assembly NR_077060.1 -
+9606 11 111840726 111849704 + NW_004929381.1 15520155 15529133 + NM_001276503.1 GeneID:6392 RNA CHM1_1.1-Primary Assembly NM_001276503.1 best RefSeq;identical;N
+9606 11 111840726 111849704 + NW_004929381.1 15520155 15529133 + NM_001276504.1 GeneID:6392 RNA CHM1_1.1-Primary Assembly NM_001276504.1 best RefSeq;identical;N
+9606 11 111840726 111849704 + NW_004929381.1 15520155 15529133 + NM_001276506.1 GeneID:6392 RNA CHM1_1.1-Primary Assembly NM_001276506.1 best RefSeq;mismatch;N
+9606 11 111840726 111849704 + NW_004929381.1 15520155 15529133 + NM_003002.3 GeneID:6392 RNA CHM1_1.1-Primary Assembly NM_003002.3 best RefSeq;identical;N
+9606 11 111840726 111849704 + NW_004929381.1 15520155 15529133 + NR_077060.1 GeneID:6392 RNA CHM1_1.1-Primary Assembly NR_077060.1
+9606 11 111840726 111849704 + NW_004929381.1 15520155 15529133 + SDHD GeneID:6392 GENE CHM1_1.1-Primary Assembly - best RefSeq;identical;N
+9606 11 111840810 111840861 + NW_004929381.1 15520239 15520290 + NP_001263432.1 GeneID:6392 CDS CHM1_1.1-Primary Assembly NM_001276503.1 -
+9606 11 111840810 111840861 + NW_004929381.1 15520239 15520290 + NP_001263433.1 GeneID:6392 CDS CHM1_1.1-Primary Assembly NM_001276504.1 -
+9606 11 111840810 111840861 + NW_004929381.1 15520239 15520290 + NP_001263435.1 GeneID:6392 CDS CHM1_1.1-Primary Assembly NM_001276506.1 -
+9606 11 111840810 111840861 + NW_004929381.1 15520239 15520290 + NP_002993.1 GeneID:6392 CDS CHM1_1.1-Primary Assembly NM_003002.3 -
+9606 11 111841759 111841875 + NW_004929381.1 15521188 15521304 + NP_001263432.1 GeneID:6392 CDS CHM1_1.1-Primary Assembly NM_001276503.1 -
+9606 11 111841759 111841875 + NW_004929381.1 15521188 15521304 + NP_001263435.1 GeneID:6392 CDS CHM1_1.1-Primary Assembly NM_001276506.1 -
+9606 11 111841759 111841875 + NW_004929381.1 15521188 15521304 + NP_002993.1 GeneID:6392 CDS CHM1_1.1-Primary Assembly NM_003002.3 -
+9606 11 111841759 111841875 + NW_004929381.1 15521188 15521304 + NR_077060.1 GeneID:6392 UTR CHM1_1.1-Primary Assembly NR_077060.1 -
+9606 11 111842769 111842913 + NW_004929381.1 15522198 15522342 + NP_001263433.1 GeneID:6392 CDS CHM1_1.1-Primary Assembly NM_001276504.1 -
+9606 11 111842769 111842913 + NW_004929381.1 15522198 15522342 + NP_001263435.1 GeneID:6392 CDS CHM1_1.1-Primary Assembly NM_001276506.1 -
+9606 11 111842769 111842913 + NW_004929381.1 15522198 15522342 + NP_002993.1 GeneID:6392 CDS CHM1_1.1-Primary Assembly NM_003002.3 -
+9606 11 111842769 111842913 + NW_004929381.1 15522198 15522342 + NR_077060.1 GeneID:6392 UTR CHM1_1.1-Primary Assembly NR_077060.1 -
+9606 11 111844982 111845035 + NW_004929381.1 15524411 15524464 + NR_077060.1 GeneID:6392 UTR CHM1_1.1-Primary Assembly NR_077060.1 -
+9606 11 111846983 111847100 + NW_004929381.1 15526412 15526529 + NP_001263435.1 GeneID:6392 CDS CHM1_1.1-Primary Assembly NM_001276506.1 -
+9606 11 111847101 111847112 + NW_004929381.1 15526530 15526541 + NM_001276506.1 GeneID:6392 UTR CHM1_1.1-Primary Assembly NM_001276506.1 -
+9606 11 111848708 111848796 + NW_004929381.1 15528137 15528225 + NP_001263432.1 GeneID:6392 CDS CHM1_1.1-Primary Assembly NM_001276503.1 -
+9606 11 111848708 111848873 + NW_004929381.1 15528137 15528302 + NP_001263433.1 GeneID:6392 CDS CHM1_1.1-Primary Assembly NM_001276504.1 -
+9606 11 111848708 111848873 + NW_004929381.1 15528137 15528302 + NP_002993.1 GeneID:6392 CDS CHM1_1.1-Primary Assembly NM_003002.3 -
+9606 11 111848708 111849704 + NW_004929381.1 15528137 15529133 + NM_001276506.1 GeneID:6392 UTR CHM1_1.1-Primary Assembly NM_001276506.1 -
+9606 11 111848708 111849704 + NW_004929381.1 15528137 15529133 + NR_077060.1 GeneID:6392 UTR CHM1_1.1-Primary Assembly NR_077060.1 -
+9606 11 111848797 111849704 + NW_004929381.1 15528226 15529133 + NM_001276503.1 GeneID:6392 UTR CHM1_1.1-Primary Assembly NM_001276503.1 -
+9606 11 111848874 111849704 + NW_004929381.1 15528303 15529133 + NM_001276504.1 GeneID:6392 UTR CHM1_1.1-Primary Assembly NM_001276504.1 -
+9606 11 111848874 111849704 + NW_004929381.1 15528303 15529133 + NM_003002.3 GeneID:6392 UTR CHM1_1.1-Primary Assembly NM_003002.3 -
+9606 11 111957548 111957631 + NT_033899.8 15519964 15520047 + NM_001276503.1 GeneID:6392 UTR GRCh37.p13-Primary Assembly NM_001276503.1 -
+9606 11 111957548 111957631 + NT_033899.8 15519964 15520047 + NM_001276504.1 GeneID:6392 UTR GRCh37.p13-Primary Assembly NM_001276504.1 -
+9606 11 111957548 111957631 + NT_033899.8 15519964 15520047 + NM_001276506.1 GeneID:6392 UTR GRCh37.p13-Primary Assembly NM_001276506.1 -
+9606 11 111957548 111957631 + NT_033899.8 15519964 15520047 + NM_003002.3 GeneID:6392 UTR GRCh37.p13-Primary Assembly NM_003002.3 -
+9606 11 111957548 111957683 + NT_033899.8 15519964 15520099 + NR_077060.1 GeneID:6392 UTR GRCh37.p13-Primary Assembly NR_077060.1 -
+9606 11 111957548 111966525 + NT_033899.8 15519964 15528941 + NM_001276503.1 GeneID:6392 RNA GRCh37.p13-Primary Assembly NM_001276503.1 best RefSeq;identical;N
+9606 11 111957548 111966525 + NT_033899.8 15519964 15528941 + NM_001276504.1 GeneID:6392 RNA GRCh37.p13-Primary Assembly NM_001276504.1 best RefSeq;identical;N
+9606 11 111957548 111966525 + NT_033899.8 15519964 15528941 + NM_001276506.1 GeneID:6392 RNA GRCh37.p13-Primary Assembly NM_001276506.1 best RefSeq;identical;N
+9606 11 111957548 111966525 + NT_033899.8 15519964 15528941 + NM_003002.3 GeneID:6392 RNA GRCh37.p13-Primary Assembly NM_003002.3 best RefSeq;identical;N
+9606 11 111957548 111966525 + NT_033899.8 15519964 15528941 + NR_077060.1 GeneID:6392 RNA GRCh37.p13-Primary Assembly NR_077060.1
+9606 11 111957548 111966525 + NT_033899.8 15519964 15528941 + SDHD GeneID:6392 GENE GRCh37.p13-Primary Assembly - best RefSeq;identical;N
+9606 11 111957553 111957631 + NT_033899.8 15519969 15520047 + XM_005271644.1 GeneID:6392 UTR GRCh37.p13-Primary Assembly XM_005271644.1 -
+9606 11 111957553 111963933 + NT_033899.8 15519969 15526349 + XM_005271644.1 GeneID:6392 RNA GRCh37.p13-Primary Assembly XM_005271644.1 mRNA;identical;N
+9606 11 111957632 111957683 + NT_033899.8 15520048 15520099 + GeneID:6392 CDS GRCh37.p13-Primary Assembly XM_005271644.1 -
+9606 11 111957632 111957683 + NT_033899.8 15520048 15520099 + NP_001263432.1 GeneID:6392 CDS GRCh37.p13-Primary Assembly NM_001276503.1 -
+9606 11 111957632 111957683 + NT_033899.8 15520048 15520099 + NP_001263433.1 GeneID:6392 CDS GRCh37.p13-Primary Assembly NM_001276504.1 -
+9606 11 111957632 111957683 + NT_033899.8 15520048 15520099 + NP_001263435.1 GeneID:6392 CDS GRCh37.p13-Primary Assembly NM_001276506.1 -
+9606 11 111957632 111957683 + NT_033899.8 15520048 15520099 + NP_002993.1 GeneID:6392 CDS GRCh37.p13-Primary Assembly NM_003002.3 -
+9606 11 111958581 111958697 + NT_033899.8 15520997 15521113 + GeneID:6392 CDS GRCh37.p13-Primary Assembly XM_005271644.1 -
+9606 11 111958581 111958697 + NT_033899.8 15520997 15521113 + NP_001263432.1 GeneID:6392 CDS GRCh37.p13-Primary Assembly NM_001276503.1 -
+9606 11 111958581 111958697 + NT_033899.8 15520997 15521113 + NP_001263435.1 GeneID:6392 CDS GRCh37.p13-Primary Assembly NM_001276506.1 -
+9606 11 111958581 111958697 + NT_033899.8 15520997 15521113 + NP_002993.1 GeneID:6392 CDS GRCh37.p13-Primary Assembly NM_003002.3 -
+9606 11 111958581 111958697 + NT_033899.8 15520997 15521113 + NR_077060.1 GeneID:6392 UTR GRCh37.p13-Primary Assembly NR_077060.1 -
+9606 11 111959591 111959735 + NT_033899.8 15522007 15522151 + GeneID:6392 CDS GRCh37.p13-Primary Assembly XM_005271644.1 -
+9606 11 111959591 111959735 + NT_033899.8 15522007 15522151 + NP_001263433.1 GeneID:6392 CDS GRCh37.p13-Primary Assembly NM_001276504.1 -
+9606 11 111959591 111959735 + NT_033899.8 15522007 15522151 + NP_001263435.1 GeneID:6392 CDS GRCh37.p13-Primary Assembly NM_001276506.1 -
+9606 11 111959591 111959735 + NT_033899.8 15522007 15522151 + NP_002993.1 GeneID:6392 CDS GRCh37.p13-Primary Assembly NM_003002.3 -
+9606 11 111959591 111959735 + NT_033899.8 15522007 15522151 + NR_077060.1 GeneID:6392 UTR GRCh37.p13-Primary Assembly NR_077060.1 -
+9606 11 111961803 111961856 + NT_033899.8 15524219 15524272 + NR_077060.1 GeneID:6392 UTR GRCh37.p13-Primary Assembly NR_077060.1 -
+9606 11 111963804 111963921 + NT_033899.8 15526220 15526337 + GeneID:6392 CDS GRCh37.p13-Primary Assembly XM_005271644.1 -
+9606 11 111963804 111963921 + NT_033899.8 15526220 15526337 + NP_001263435.1 GeneID:6392 CDS GRCh37.p13-Primary Assembly NM_001276506.1 -
+9606 11 111963922 111963933 + NT_033899.8 15526338 15526349 + NM_001276506.1 GeneID:6392 UTR GRCh37.p13-Primary Assembly NM_001276506.1 -
+9606 11 111963922 111963933 + NT_033899.8 15526338 15526349 + XM_005271644.1 GeneID:6392 UTR GRCh37.p13-Primary Assembly XM_005271644.1 -
+9606 11 111965529 111965617 + NT_033899.8 15527945 15528033 + NP_001263432.1 GeneID:6392 CDS GRCh37.p13-Primary Assembly NM_001276503.1 -
+9606 11 111965529 111965694 + NT_033899.8 15527945 15528110 + NP_001263433.1 GeneID:6392 CDS GRCh37.p13-Primary Assembly NM_001276504.1 -
+9606 11 111965529 111965694 + NT_033899.8 15527945 15528110 + NP_002993.1 GeneID:6392 CDS GRCh37.p13-Primary Assembly NM_003002.3 -
+9606 11 111965529 111966525 + NT_033899.8 15527945 15528941 + NM_001276506.1 GeneID:6392 UTR GRCh37.p13-Primary Assembly NM_001276506.1 -
+9606 11 111965529 111966525 + NT_033899.8 15527945 15528941 + NR_077060.1 GeneID:6392 UTR GRCh37.p13-Primary Assembly NR_077060.1 -
+9606 11 111965618 111966525 + NT_033899.8 15528034 15528941 + NM_001276503.1 GeneID:6392 UTR GRCh37.p13-Primary Assembly NM_001276503.1 -
+9606 11 111965695 111966525 + NT_033899.8 15528111 15528941 + NM_001276504.1 GeneID:6392 UTR GRCh37.p13-Primary Assembly NM_001276504.1 -
+9606 11 111965695 111966525 + NT_033899.8 15528111 15528941 + NM_003002.3 GeneID:6392 UTR GRCh37.p13-Primary Assembly NM_003002.3 -
+9606 11 111929662 111929778 + NW_004929381.1 15609091 15609207 + NM_001256398.1 GeneID:83875 UTR CHM1_1.1-Primary Assembly NM_001256398.1 -
+9606 11 111929662 111929778 + NW_004929381.1 15609091 15609207 + NM_031938.5 GeneID:83875 UTR CHM1_1.1-Primary Assembly NM_031938.5 -
+9606 11 111929662 111973106 + NW_004929381.1 15609091 15652535 + BCO2 GeneID:83875 GENE CHM1_1.1-Primary Assembly - best RefSeq;identical;N
+9606 11 111929662 111973106 + NW_004929381.1 15609091 15652535 + NM_001256398.1 GeneID:83875 RNA CHM1_1.1-Primary Assembly NM_001256398.1 best RefSeq;identical;N
+9606 11 111929662 111973106 + NW_004929381.1 15609091 15652535 + NM_031938.5 GeneID:83875 RNA CHM1_1.1-Primary Assembly NM_031938.5 best RefSeq;identical;N
+9606 11 111929779 111929866 + NW_004929381.1 15609208 15609295 + NP_001243327.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256398.1 -
+9606 11 111929779 111929866 + NW_004929381.1 15609208 15609295 + NP_114144.4 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_031938.5 -
+9606 11 111930543 111930635 + NW_004929381.1 15609972 15610064 + NM_001037290.2 GeneID:83875 UTR CHM1_1.1-Primary Assembly NM_001037290.2 -
+9606 11 111930543 111930635 + NW_004929381.1 15609972 15610064 + NM_001256397.1 GeneID:83875 UTR CHM1_1.1-Primary Assembly NM_001256397.1 -
+9606 11 111930543 111930635 + NW_004929381.1 15609972 15610064 + NM_001256400.1 GeneID:83875 UTR CHM1_1.1-Primary Assembly NM_001256400.1 -
+9606 11 111930543 111973106 + NW_004929381.1 15609972 15652535 + NM_001037290.2 GeneID:83875 RNA CHM1_1.1-Primary Assembly NM_001037290.2 best RefSeq;identical;N
+9606 11 111930543 111973106 + NW_004929381.1 15609972 15652535 + NM_001256397.1 GeneID:83875 RNA CHM1_1.1-Primary Assembly NM_001256397.1 best RefSeq;identical;N
+9606 11 111930543 111973106 + NW_004929381.1 15609972 15652535 + NM_001256400.1 GeneID:83875 RNA CHM1_1.1-Primary Assembly NM_001256400.1 best RefSeq;identical;N
+9606 11 111933446 111933459 + NW_004929381.1 15612875 15612888 + NM_001037290.2 GeneID:83875 UTR CHM1_1.1-Primary Assembly NM_001037290.2 -
+9606 11 111933446 111933459 + NW_004929381.1 15612875 15612888 + NM_001256397.1 GeneID:83875 UTR CHM1_1.1-Primary Assembly NM_001256397.1 -
+9606 11 111933446 111933650 + NW_004929381.1 15612875 15613079 + NP_001243327.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256398.1 -
+9606 11 111933446 111933650 + NW_004929381.1 15612875 15613079 + NP_114144.4 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_031938.5 -
+9606 11 111933460 111933650 + NW_004929381.1 15612889 15613079 + NP_001032367.2 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001037290.2 -
+9606 11 111933460 111933650 + NW_004929381.1 15612889 15613079 + NP_001243326.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256397.1 -
+9606 11 111947651 111947672 + NW_004929381.1 15627080 15627101 + NM_001256400.1 GeneID:83875 UTR CHM1_1.1-Primary Assembly NM_001256400.1 -
+9606 11 111947651 111947874 + NW_004929381.1 15627080 15627303 + NP_001032367.2 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001037290.2 -
+9606 11 111947651 111947874 + NW_004929381.1 15627080 15627303 + NP_001243326.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256397.1 -
+9606 11 111947651 111947874 + NW_004929381.1 15627080 15627303 + NP_001243327.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256398.1 -
+9606 11 111947651 111947874 + NW_004929381.1 15627080 15627303 + NP_114144.4 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_031938.5 -
+9606 11 111947673 111947874 + NW_004929381.1 15627102 15627303 + NP_001243329.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256400.1 -
+9606 11 111948056 111948171 + NW_004929381.1 15627485 15627600 + NP_001032367.2 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001037290.2 -
+9606 11 111948056 111948171 + NW_004929381.1 15627485 15627600 + NP_001243326.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256397.1 -
+9606 11 111948056 111948171 + NW_004929381.1 15627485 15627600 + NP_001243329.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256400.1 -
+9606 11 111948056 111948171 + NW_004929381.1 15627485 15627600 + NP_114144.4 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_031938.5 -
+9606 11 111948830 111948932 + NW_004929381.1 15628259 15628361 + NP_001032367.2 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001037290.2 -
+9606 11 111948830 111948932 + NW_004929381.1 15628259 15628361 + NP_001243326.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256397.1 -
+9606 11 111948830 111948932 + NW_004929381.1 15628259 15628361 + NP_001243329.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256400.1 -
+9606 11 111948830 111948932 + NW_004929381.1 15628259 15628361 + NP_114144.4 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_031938.5 -
+9606 11 111953873 111954001 + NW_004929381.1 15633302 15633430 + NP_001032367.2 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001037290.2 -
+9606 11 111953873 111954001 + NW_004929381.1 15633302 15633430 + NP_001243326.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256397.1 -
+9606 11 111953873 111954001 + NW_004929381.1 15633302 15633430 + NP_001243327.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256398.1 -
+9606 11 111953873 111954001 + NW_004929381.1 15633302 15633430 + NP_001243329.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256400.1 -
+9606 11 111953873 111954001 + NW_004929381.1 15633302 15633430 + NP_114144.4 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_031938.5 -
+9606 11 111954787 111954947 + NW_004929381.1 15634216 15634376 + NP_001032367.2 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001037290.2 -
+9606 11 111954787 111954947 + NW_004929381.1 15634216 15634376 + NP_001243326.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256397.1 -
+9606 11 111954787 111954947 + NW_004929381.1 15634216 15634376 + NP_001243327.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256398.1 -
+9606 11 111954787 111954947 + NW_004929381.1 15634216 15634376 + NP_001243329.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256400.1 -
+9606 11 111954787 111954947 + NW_004929381.1 15634216 15634376 + NP_114144.4 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_031938.5 -
+9606 11 111956197 111956364 + NW_004929381.1 15635626 15635793 + NP_001032367.2 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001037290.2 -
+9606 11 111956197 111956364 + NW_004929381.1 15635626 15635793 + NP_001243326.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256397.1 -
+9606 11 111956197 111956364 + NW_004929381.1 15635626 15635793 + NP_001243327.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256398.1 -
+9606 11 111956197 111956364 + NW_004929381.1 15635626 15635793 + NP_001243329.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256400.1 -
+9606 11 111956197 111956364 + NW_004929381.1 15635626 15635793 + NP_114144.4 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_031938.5 -
+9606 11 111967900 111968037 + NW_004929381.1 15647329 15647466 + NP_001032367.2 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001037290.2 -
+9606 11 111967900 111968037 + NW_004929381.1 15647329 15647466 + NP_001243326.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256397.1 -
+9606 11 111967900 111968037 + NW_004929381.1 15647329 15647466 + NP_001243327.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256398.1 -
+9606 11 111967900 111968037 + NW_004929381.1 15647329 15647466 + NP_001243329.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256400.1 -
+9606 11 111967900 111968037 + NW_004929381.1 15647329 15647466 + NP_114144.4 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_031938.5 -
+9606 11 111968938 111969102 + NW_004929381.1 15648367 15648531 + NP_001243326.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256397.1 -
+9606 11 111968938 111969120 + NW_004929381.1 15648367 15648549 + NP_001032367.2 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001037290.2 -
+9606 11 111968938 111969120 + NW_004929381.1 15648367 15648549 + NP_001243327.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256398.1 -
+9606 11 111968938 111969120 + NW_004929381.1 15648367 15648549 + NP_001243329.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256400.1 -
+9606 11 111968938 111969120 + NW_004929381.1 15648367 15648549 + NP_114144.4 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_031938.5 -
+9606 11 111970397 111970507 + NW_004929381.1 15649826 15649936 + NP_001032367.2 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001037290.2 -
+9606 11 111970397 111970507 + NW_004929381.1 15649826 15649936 + NP_001243326.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256397.1 -
+9606 11 111970397 111970507 + NW_004929381.1 15649826 15649936 + NP_001243327.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256398.1 -
+9606 11 111970397 111970507 + NW_004929381.1 15649826 15649936 + NP_001243329.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256400.1 -
+9606 11 111970397 111970507 + NW_004929381.1 15649826 15649936 + NP_114144.4 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_031938.5 -
+9606 11 111971938 111972051 + NW_004929381.1 15651367 15651480 + NP_001032367.2 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001037290.2 -
+9606 11 111971938 111972051 + NW_004929381.1 15651367 15651480 + NP_001243326.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256397.1 -
+9606 11 111971938 111972051 + NW_004929381.1 15651367 15651480 + NP_001243327.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256398.1 -
+9606 11 111971938 111972051 + NW_004929381.1 15651367 15651480 + NP_001243329.1 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_001256400.1 -
+9606 11 111971938 111972051 + NW_004929381.1 15651367 15651480 + NP_114144.4 GeneID:83875 CDS CHM1_1.1-Primary Assembly NM_031938.5 -
+9606 11 111972052 111973106 + NW_004929381.1 15651481 15652535 + NM_001037290.2 GeneID:83875 UTR CHM1_1.1-Primary Assembly NM_001037290.2 -
+9606 11 111972052 111973106 + NW_004929381.1 15651481 15652535 + NM_001256397.1 GeneID:83875 UTR CHM1_1.1-Primary Assembly NM_001256397.1 -
+9606 11 111972052 111973106 + NW_004929381.1 15651481 15652535 + NM_001256398.1 GeneID:83875 UTR CHM1_1.1-Primary Assembly NM_001256398.1 -
+9606 11 111972052 111973106 + NW_004929381.1 15651481 15652535 + NM_001256400.1 GeneID:83875 UTR CHM1_1.1-Primary Assembly NM_001256400.1 -
+9606 11 111972052 111973106 + NW_004929381.1 15651481 15652535 + NM_031938.5 GeneID:83875 UTR CHM1_1.1-Primary Assembly NM_031938.5 -
+9606 11 112046208 112046324 + NT_033899.8 15608624 15608740 + NM_001256398.1 GeneID:83875 UTR GRCh37.p13-Primary Assembly NM_001256398.1 -
+9606 11 112046208 112046324 + NT_033899.8 15608624 15608740 + NM_031938.5 GeneID:83875 UTR GRCh37.p13-Primary Assembly NM_031938.5 -
+9606 11 112046208 112089652 + NT_033899.8 15608624 15652068 + BCO2 GeneID:83875 GENE GRCh37.p13-Primary Assembly - best RefSeq;mismatch;N
+9606 11 112046208 112089652 + NT_033899.8 15608624 15652068 + NM_001256398.1 GeneID:83875 RNA GRCh37.p13-Primary Assembly NM_001256398.1 best RefSeq;mismatch;N
+9606 11 112046208 112089652 + NT_033899.8 15608624 15652068 + NM_031938.5 GeneID:83875 RNA GRCh37.p13-Primary Assembly NM_031938.5 best RefSeq;mismatch;N
+9606 11 112046255 112046324 + NT_033899.8 15608671 15608740 + XM_005271692.1 GeneID:83875 UTR GRCh37.p13-Primary Assembly XM_005271692.1 -
+9606 11 112046255 112089652 + NT_033899.8 15608671 15652068 + XM_005271692.1 GeneID:83875 RNA GRCh37.p13-Primary Assembly XM_005271692.1 mRNA;identical;N
+9606 11 112046325 112046412 + NT_033899.8 15608741 15608828 + GeneID:83875 CDS GRCh37.p13-Primary Assembly XM_005271692.1 -
+9606 11 112046325 112046412 + NT_033899.8 15608741 15608828 + NP_001243327.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256398.1 -
+9606 11 112046325 112046412 + NT_033899.8 15608741 15608828 + NP_114144.4 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_031938.5 -
+9606 11 112047089 112047181 + NT_033899.8 15609505 15609597 + NM_001037290.2 GeneID:83875 UTR GRCh37.p13-Primary Assembly NM_001037290.2 -
+9606 11 112047089 112047181 + NT_033899.8 15609505 15609597 + NM_001256397.1 GeneID:83875 UTR GRCh37.p13-Primary Assembly NM_001256397.1 -
+9606 11 112047089 112047181 + NT_033899.8 15609505 15609597 + NM_001256400.1 GeneID:83875 UTR GRCh37.p13-Primary Assembly NM_001256400.1 -
+9606 11 112047089 112089652 + NT_033899.8 15609505 15652068 + NM_001037290.2 GeneID:83875 RNA GRCh37.p13-Primary Assembly NM_001037290.2 best RefSeq;mismatch;N
+9606 11 112047089 112089652 + NT_033899.8 15609505 15652068 + NM_001256397.1 GeneID:83875 RNA GRCh37.p13-Primary Assembly NM_001256397.1 best RefSeq;mismatch;N
+9606 11 112047089 112089652 + NT_033899.8 15609505 15652068 + NM_001256400.1 GeneID:83875 RNA GRCh37.p13-Primary Assembly NM_001256400.1 best RefSeq;mismatch;N
+9606 11 112050001 112050014 + NT_033899.8 15612417 15612430 + NM_001037290.2 GeneID:83875 UTR GRCh37.p13-Primary Assembly NM_001037290.2 -
+9606 11 112050001 112050014 + NT_033899.8 15612417 15612430 + NM_001256397.1 GeneID:83875 UTR GRCh37.p13-Primary Assembly NM_001256397.1 -
+9606 11 112050001 112050205 + NT_033899.8 15612417 15612621 + GeneID:83875 CDS GRCh37.p13-Primary Assembly XM_005271692.1 -
+9606 11 112050001 112050205 + NT_033899.8 15612417 15612621 + NP_001243327.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256398.1 -
+9606 11 112050001 112050205 + NT_033899.8 15612417 15612621 + NP_114144.4 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_031938.5 -
+9606 11 112050015 112050205 + NT_033899.8 15612431 15612621 + NP_001032367.2 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001037290.2 -
+9606 11 112050015 112050205 + NT_033899.8 15612431 15612621 + NP_001243326.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256397.1 -
+9606 11 112064197 112064218 + NT_033899.8 15626613 15626634 + NM_001256400.1 GeneID:83875 UTR GRCh37.p13-Primary Assembly NM_001256400.1 -
+9606 11 112064197 112064420 + NT_033899.8 15626613 15626836 + GeneID:83875 CDS GRCh37.p13-Primary Assembly XM_005271692.1 -
+9606 11 112064197 112064420 + NT_033899.8 15626613 15626836 + NP_001032367.2 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001037290.2 -
+9606 11 112064197 112064420 + NT_033899.8 15626613 15626836 + NP_001243326.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256397.1 -
+9606 11 112064197 112064420 + NT_033899.8 15626613 15626836 + NP_001243327.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256398.1 -
+9606 11 112064197 112064420 + NT_033899.8 15626613 15626836 + NP_114144.4 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_031938.5 -
+9606 11 112064219 112064420 + NT_033899.8 15626635 15626836 + NP_001243329.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256400.1 -
+9606 11 112064602 112064717 + NT_033899.8 15627018 15627133 + GeneID:83875 CDS GRCh37.p13-Primary Assembly XM_005271692.1 -
+9606 11 112064602 112064717 + NT_033899.8 15627018 15627133 + NP_001032367.2 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001037290.2 -
+9606 11 112064602 112064717 + NT_033899.8 15627018 15627133 + NP_001243326.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256397.1 -
+9606 11 112064602 112064717 + NT_033899.8 15627018 15627133 + NP_001243329.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256400.1 -
+9606 11 112064602 112064717 + NT_033899.8 15627018 15627133 + NP_114144.4 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_031938.5 -
+9606 11 112065376 112065478 + NT_033899.8 15627792 15627894 + GeneID:83875 CDS GRCh37.p13-Primary Assembly XM_005271692.1 -
+9606 11 112065376 112065478 + NT_033899.8 15627792 15627894 + NP_001032367.2 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001037290.2 -
+9606 11 112065376 112065478 + NT_033899.8 15627792 15627894 + NP_001243326.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256397.1 -
+9606 11 112065376 112065478 + NT_033899.8 15627792 15627894 + NP_001243329.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256400.1 -
+9606 11 112065376 112065478 + NT_033899.8 15627792 15627894 + NP_114144.4 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_031938.5 -
+9606 11 112070422 112070550 + NT_033899.8 15632838 15632966 + NP_001032367.2 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001037290.2 -
+9606 11 112070422 112070550 + NT_033899.8 15632838 15632966 + NP_001243326.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256397.1 -
+9606 11 112070422 112070550 + NT_033899.8 15632838 15632966 + NP_001243327.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256398.1 -
+9606 11 112070422 112070550 + NT_033899.8 15632838 15632966 + NP_001243329.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256400.1 -
+9606 11 112070422 112070550 + NT_033899.8 15632838 15632966 + NP_114144.4 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_031938.5 -
+9606 11 112071336 112071496 + NT_033899.8 15633752 15633912 + GeneID:83875 CDS GRCh37.p13-Primary Assembly XM_005271692.1 -
+9606 11 112071336 112071496 + NT_033899.8 15633752 15633912 + NP_001032367.2 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001037290.2 -
+9606 11 112071336 112071496 + NT_033899.8 15633752 15633912 + NP_001243326.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256397.1 -
+9606 11 112071336 112071496 + NT_033899.8 15633752 15633912 + NP_001243327.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256398.1 -
+9606 11 112071336 112071496 + NT_033899.8 15633752 15633912 + NP_001243329.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256400.1 -
+9606 11 112071336 112071496 + NT_033899.8 15633752 15633912 + NP_114144.4 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_031938.5 -
+9606 11 112072746 112072913 + NT_033899.8 15635162 15635329 + GeneID:83875 CDS GRCh37.p13-Primary Assembly XM_005271692.1 -
+9606 11 112072746 112072913 + NT_033899.8 15635162 15635329 + NP_001032367.2 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001037290.2 -
+9606 11 112072746 112072913 + NT_033899.8 15635162 15635329 + NP_001243326.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256397.1 -
+9606 11 112072746 112072913 + NT_033899.8 15635162 15635329 + NP_001243327.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256398.1 -
+9606 11 112072746 112072913 + NT_033899.8 15635162 15635329 + NP_001243329.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256400.1 -
+9606 11 112072746 112072913 + NT_033899.8 15635162 15635329 + NP_114144.4 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_031938.5 -
+9606 11 112084447 112084584 + NT_033899.8 15646863 15647000 + GeneID:83875 CDS GRCh37.p13-Primary Assembly XM_005271692.1 -
+9606 11 112084447 112084584 + NT_033899.8 15646863 15647000 + NP_001032367.2 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001037290.2 -
+9606 11 112084447 112084584 + NT_033899.8 15646863 15647000 + NP_001243326.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256397.1 -
+9606 11 112084447 112084584 + NT_033899.8 15646863 15647000 + NP_001243327.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256398.1 -
+9606 11 112084447 112084584 + NT_033899.8 15646863 15647000 + NP_001243329.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256400.1 -
+9606 11 112084447 112084584 + NT_033899.8 15646863 15647000 + NP_114144.4 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_031938.5 -
+9606 11 112085485 112085649 + NT_033899.8 15647901 15648065 + NP_001243326.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256397.1 -
+9606 11 112085485 112085667 + NT_033899.8 15647901 15648083 + GeneID:83875 CDS GRCh37.p13-Primary Assembly XM_005271692.1 -
+9606 11 112085485 112085667 + NT_033899.8 15647901 15648083 + NP_001032367.2 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001037290.2 -
+9606 11 112085485 112085667 + NT_033899.8 15647901 15648083 + NP_001243327.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256398.1 -
+9606 11 112085485 112085667 + NT_033899.8 15647901 15648083 + NP_001243329.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256400.1 -
+9606 11 112085485 112085667 + NT_033899.8 15647901 15648083 + NP_114144.4 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_031938.5 -
+9606 11 112086943 112087053 + NT_033899.8 15649359 15649469 + GeneID:83875 CDS GRCh37.p13-Primary Assembly XM_005271692.1 -
+9606 11 112086943 112087053 + NT_033899.8 15649359 15649469 + NP_001032367.2 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001037290.2 -
+9606 11 112086943 112087053 + NT_033899.8 15649359 15649469 + NP_001243326.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256397.1 -
+9606 11 112086943 112087053 + NT_033899.8 15649359 15649469 + NP_001243327.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256398.1 -
+9606 11 112086943 112087053 + NT_033899.8 15649359 15649469 + NP_001243329.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256400.1 -
+9606 11 112086943 112087053 + NT_033899.8 15649359 15649469 + NP_114144.4 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_031938.5 -
+9606 11 112088484 112088597 + NT_033899.8 15650900 15651013 + GeneID:83875 CDS GRCh37.p13-Primary Assembly XM_005271692.1 -
+9606 11 112088484 112088597 + NT_033899.8 15650900 15651013 + NP_001032367.2 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001037290.2 -
+9606 11 112088484 112088597 + NT_033899.8 15650900 15651013 + NP_001243326.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256397.1 -
+9606 11 112088484 112088597 + NT_033899.8 15650900 15651013 + NP_001243327.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256398.1 -
+9606 11 112088484 112088597 + NT_033899.8 15650900 15651013 + NP_001243329.1 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_001256400.1 -
+9606 11 112088484 112088597 + NT_033899.8 15650900 15651013 + NP_114144.4 GeneID:83875 CDS GRCh37.p13-Primary Assembly NM_031938.5 -
+9606 11 112088598 112089652 + NT_033899.8 15651014 15652068 + NM_001037290.2 GeneID:83875 UTR GRCh37.p13-Primary Assembly NM_001037290.2 -
+9606 11 112088598 112089652 + NT_033899.8 15651014 15652068 + NM_001256397.1 GeneID:83875 UTR GRCh37.p13-Primary Assembly NM_001256397.1 -
+9606 11 112088598 112089652 + NT_033899.8 15651014 15652068 + NM_001256398.1 GeneID:83875 UTR GRCh37.p13-Primary Assembly NM_001256398.1 -
+9606 11 112088598 112089652 + NT_033899.8 15651014 15652068 + NM_001256400.1 GeneID:83875 UTR GRCh37.p13-Primary Assembly NM_001256400.1 -
+9606 11 112088598 112089652 + NT_033899.8 15651014 15652068 + NM_031938.5 GeneID:83875 UTR GRCh37.p13-Primary Assembly NM_031938.5 -
+9606 11 112088598 112089652 + NT_033899.8 15651014 15652068 + XM_005271692.1 GeneID:83875 UTR GRCh37.p13-Primary Assembly XM_005271692.1 -
+9606 11 111771756 111771864 + NW_004929381.1 15451185 15451293 + NP_001033043.1 GeneID:85458 CDS CHM1_1.1-Primary Assembly NM_001037954.3 -
+9606 11 111771756 111771864 + NW_004929381.1 15451185 15451293 + NP_219493.1 GeneID:85458 CDS CHM1_1.1-Primary Assembly NM_033425.4 -
+9606 11 111772935 111773015 + NW_004929381.1 15452364 15452444 + NP_001033043.1 GeneID:85458 CDS CHM1_1.1-Primary Assembly NM_001037954.3 -
+9606 11 111772935 111773015 + NW_004929381.1 15452364 15452444 + NP_219493.1 GeneID:85458 CDS CHM1_1.1-Primary Assembly NM_033425.4 -
+9606 11 111773016 111776629 + NW_004929381.1 15452445 15456058 + NM_001037954.3 GeneID:85458 UTR CHM1_1.1-Primary Assembly NM_001037954.3 -
+9606 11 111773016 111776629 + NW_004929381.1 15452445 15456058 + NM_033425.4 GeneID:85458 UTR CHM1_1.1-Primary Assembly NM_033425.4 -
+9606 11 111797868 111798111 + NT_033899.8 15360284 15360527 + NM_001278542.1 GeneID:85458 UTR GRCh37.p13-Primary Assembly NM_001278542.1 -
+9606 11 111797868 111846719 + NT_033899.8 15360284 15409135 + NM_001278542.1 GeneID:85458 RNA GRCh37.p13-Primary Assembly NM_001278542.1 best RefSeq;identical;N
+9606 11 111797868 111893374 + NT_033899.8 15360284 15455790 + DIXDC1 GeneID:85458 GENE GRCh37.p13-Primary Assembly - best RefSeq;identical;N
+9606 11 111800542 111800577 + NT_033899.8 15362958 15362993 + NM_001278542.1 GeneID:85458 UTR GRCh37.p13-Primary Assembly NM_001278542.1 -
+9606 11 111800578 111800634 + NT_033899.8 15362994 15363050 + NP_001265471.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001278542.1 -
+9606 11 111807927 111808223 + NT_033899.8 15370343 15370639 + NM_001037954.3 GeneID:85458 UTR GRCh37.p13-Primary Assembly NM_001037954.3 -
+9606 11 111807927 111893374 + NT_033899.8 15370343 15455790 + NM_001037954.3 GeneID:85458 RNA GRCh37.p13-Primary Assembly NM_001037954.3 best RefSeq;poor;N
+9606 11 111808224 111808283 + NT_033899.8 15370640 15370699 + NP_001033043.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001037954.3 -
+9606 11 111835273 111835402 + NT_033899.8 15397689 15397818 + NP_001033043.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001037954.3 -
+9606 11 111835273 111835402 + NT_033899.8 15397689 15397818 + NP_001265471.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001278542.1 -
+9606 11 111839237 111839362 + NT_033899.8 15401653 15401778 + NP_001033043.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001037954.3 -
+9606 11 111839237 111839362 + NT_033899.8 15401653 15401778 + NP_001265471.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001278542.1 -
+9606 11 111844747 111844978 + NT_033899.8 15407163 15407394 + NP_001033043.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001037954.3 -
+9606 11 111844747 111844978 + NT_033899.8 15407163 15407394 + NP_001265471.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001278542.1 -
+9606 11 111845600 111845707 + NT_033899.8 15408016 15408123 + NP_001033043.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001037954.3 -
+9606 11 111845600 111845711 + NT_033899.8 15408016 15408127 + NP_001265471.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001278542.1 -
+9606 11 111845712 111846719 + NT_033899.8 15408128 15409135 + NM_001278542.1 GeneID:85458 UTR GRCh37.p13-Primary Assembly NM_001278542.1 -
+9606 11 111848033 111848496 + NT_033899.8 15410449 15410912 + NM_033425.4 GeneID:85458 UTR GRCh37.p13-Primary Assembly NM_033425.4 -
+9606 11 111848033 111893374 + NT_033899.8 15410449 15455790 + NM_033425.4 GeneID:85458 RNA GRCh37.p13-Primary Assembly NM_033425.4 best RefSeq;poor;N
+9606 11 111848497 111848519 + NT_033899.8 15410913 15410935 + NP_219493.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_033425.4 -
+9606 11 111851462 111851574 + NT_033899.8 15413878 15413990 + NP_001033043.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001037954.3 -
+9606 11 111851462 111851574 + NT_033899.8 15413878 15413990 + NP_219493.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_033425.4 -
+9606 11 111853064 111853211 + NT_033899.8 15415480 15415627 + NP_001033043.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001037954.3 -
+9606 11 111853064 111853211 + NT_033899.8 15415480 15415627 + NP_219493.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_033425.4 -
+9606 11 111855956 111856045 + NT_033899.8 15418372 15418461 + NP_001033043.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001037954.3 -
+9606 11 111855956 111856045 + NT_033899.8 15418372 15418461 + NP_219493.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_033425.4 -
+9606 11 111857595 111857648 + NT_033899.8 15420011 15420064 + NP_001033043.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001037954.3 -
+9606 11 111857595 111857648 + NT_033899.8 15420011 15420064 + NP_219493.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_033425.4 -
+9606 11 111859729 111859779 + NT_033899.8 15422145 15422195 + NP_001033043.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001037954.3 -
+9606 11 111859729 111859779 + NT_033899.8 15422145 15422195 + NP_219493.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_033425.4 -
+9606 11 111863139 111863243 + NT_033899.8 15425555 15425659 + NP_001033043.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001037954.3 -
+9606 11 111863139 111863243 + NT_033899.8 15425555 15425659 + NP_219493.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_033425.4 -
+9606 11 111863675 111863728 + NT_033899.8 15426091 15426144 + NP_001033043.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001037954.3 -
+9606 11 111863675 111863728 + NT_033899.8 15426091 15426144 + NP_219493.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_033425.4 -
+9606 11 111864220 111864312 + NT_033899.8 15426636 15426728 + NP_001033043.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001037954.3 -
+9606 11 111864220 111864312 + NT_033899.8 15426636 15426728 + NP_219493.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_033425.4 -
+9606 11 111864393 111864464 + NT_033899.8 15426809 15426880 + NP_001033043.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001037954.3 -
+9606 11 111864393 111864464 + NT_033899.8 15426809 15426880 + NP_219493.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_033425.4 -
+9606 11 111865743 111865832 + NT_033899.8 15428159 15428248 + NP_001033043.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001037954.3 -
+9606 11 111865743 111865832 + NT_033899.8 15428159 15428248 + NP_219493.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_033425.4 -
+9606 11 111866127 111866288 + NT_033899.8 15428543 15428704 + NP_001033043.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001037954.3 -
+9606 11 111866127 111866288 + NT_033899.8 15428543 15428704 + NP_219493.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_033425.4 -
+9606 11 111866804 111866870 + NT_033899.8 15429220 15429286 + NP_001033043.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001037954.3 -
+9606 11 111866804 111866870 + NT_033899.8 15429220 15429286 + NP_219493.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_033425.4 -
+9606 11 111887415 111887520 + NT_033899.8 15449831 15449936 + NP_001033043.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001037954.3 -
+9606 11 111887415 111887520 + NT_033899.8 15449831 15449936 + NP_219493.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_033425.4 -
+9606 11 111888501 111888609 + NT_033899.8 15450917 15451025 + NP_001033043.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001037954.3 -
+9606 11 111888501 111888609 + NT_033899.8 15450917 15451025 + NP_219493.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_033425.4 -
+9606 11 111889680 111889760 + NT_033899.8 15452096 15452176 + NP_001033043.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_001037954.3 -
+9606 11 111889680 111889760 + NT_033899.8 15452096 15452176 + NP_219493.1 GeneID:85458 CDS GRCh37.p13-Primary Assembly NM_033425.4 -
+9606 11 111889761 111893374 + NT_033899.8 15452177 15455790 + NM_001037954.3 GeneID:85458 UTR GRCh37.p13-Primary Assembly NM_001037954.3 -
+9606 11 111889761 111893374 + NT_033899.8 15452177 15455790 + NM_033425.4 GeneID:85458 UTR GRCh37.p13-Primary Assembly NM_033425.4 -
+9606 11 111789601 111789696 + NT_033899.8 15352017 15352112 + NM_080659.2 GeneID:91894 UTR GRCh37.p13-Primary Assembly NM_080659.2 -
+9606 11 111789601 111797595 + NT_033899.8 15352017 15360011 + C11orf52 GeneID:91894 GENE GRCh37.p13-Primary Assembly - best RefSeq;identical;N
+9606 11 111789601 111797595 + NT_033899.8 15352017 15360011 + NM_080659.2 GeneID:91894 RNA GRCh37.p13-Primary Assembly NM_080659.2 best RefSeq;identical;N
+9606 11 111789697 111789728 + NT_033899.8 15352113 15352144 + NP_542390.2 GeneID:91894 CDS GRCh37.p13-Primary Assembly NM_080659.2 -
+9606 11 111795050 111795087 + NT_033899.8 15357466 15357503 + NP_542390.2 GeneID:91894 CDS GRCh37.p13-Primary Assembly NM_080659.2 -
+9606 11 111796377 111796438 + NT_033899.8 15358793 15358854 + NP_542390.2 GeneID:91894 CDS GRCh37.p13-Primary Assembly NM_080659.2 -
+9606 11 111796684 111796923 + NT_033899.8 15359100 15359339 + NP_542390.2 GeneID:91894 CDS GRCh37.p13-Primary Assembly NM_080659.2 -
+9606 11 111796924 111797595 + NT_033899.8 15359340 15360011 + NM_080659.2 GeneID:91894 UTR GRCh37.p13-Primary Assembly NM_080659.2 -
diff --git a/tests/test_mapping.py b/tests/test_mapping.py
index 808168640bc90dca12b2c19a305c03aea7119800..30b4c7efd8bebd9f0fa650a73b6ac88c763efed6 100644
--- a/tests/test_mapping.py
+++ b/tests/test_mapping.py
@@ -5,9 +5,13 @@ Tests for the mutalyzer.mapping module.
from __future__ import unicode_literals
+import codecs
+import os
+
import pytest
-from mutalyzer.mapping import Converter
+from mutalyzer.db.models import TranscriptMapping
+from mutalyzer import mapping
pytestmark = pytest.mark.usefixtures('hg19_transcript_mappings')
@@ -15,7 +19,7 @@ pytestmark = pytest.mark.usefixtures('hg19_transcript_mappings')
@pytest.fixture
def converter(output, hg19):
- return Converter(hg19, output)
+ return mapping.Converter(hg19, output)
def test_converter(converter):
@@ -322,3 +326,54 @@ def test_ins_seq_seq_c2chrom_reverse(converter):
"""
genomic = converter.c2chrom('NM_012459.2:c.10_11ins[TTT;ATC]')
assert genomic == 'NC_000011.9:g.111957482_111957483ins[GAT;AAA]'
+
+
+def test_import_mapview(hg19):
+ original_count = TranscriptMapping.query.count()
+
+ group_label = 'GRCh37.p13-Primary Assembly'
+
+ path = os.path.join(os.path.dirname(os.path.realpath(__file__)), 'data',
+ 'hg19.chr11.111771755-112247252.seq_gene.sorted.md')
+ mapview = codecs.open(path, encoding='utf-8')
+ mapview_count = sum(1 for line in mapview
+ if line.split('\t')[12] == group_label
+ and line.split('\t')[11] == 'RNA')
+ mapview.seek(0)
+
+ mapping.import_from_mapview_file(hg19, mapview, group_label)
+
+ # Two transcripts were already in, the rest is new:
+ # - NR_028383.1
+ # - NM_012459.2
+ assert TranscriptMapping.query.count() == original_count + mapview_count - 2
+
+ # No changes here.
+ unchanged = TranscriptMapping.query.filter_by(accession='NM_012459').one()
+ assert unchanged.start == 111955524
+ assert unchanged.stop == 111957522
+ assert unchanged.exon_starts == [111955524, 111957364]
+ assert unchanged.exon_stops == [111956186, 111957522]
+ assert unchanged.cds == (111956019, 111957492)
+
+ # We made some artificial changes to the mapview file here.
+ updated = TranscriptMapping.query.filter_by(accession='NR_028383').one()
+ assert updated.start == 111955524
+ assert updated.stop == 111957525
+ assert updated.exon_starts == [111955524, 111956700, 111957364]
+ assert updated.exon_stops == [111956180, 111957034, 111957525]
+
+ # This is a new entry.
+ new = TranscriptMapping.query.filter_by(accession='NM_000317').one()
+ assert new.version == 2
+ assert new.start == 112097088
+ assert new.stop == 112104696
+ assert new.exon_starts == [112097088, 112099317, 112100931, 112101349,
+ 112103886, 112104155]
+ assert new.exon_stops == [112097249, 112099396, 112100953, 112101405,
+ 112103956, 112104696]
+ assert new.cds == (112097167, 112104278)
+ assert new.gene == 'PTS'
+ assert new.orientation == 'forward'
+ assert new.reference_type == 'refseq'
+ assert new.source == 'ncbi'