From 298e2f2461c31b7cc2c3ea22083dbf5d5f94b731 Mon Sep 17 00:00:00 2001
From: Martijn Vermaat <martijn@vermaat.name>
Date: Wed, 25 Mar 2015 17:16:16 +0100
Subject: [PATCH] Update SOAP tools server locations for testing
---
extras/soap-tools/checkSyntax.py | 2 +-
extras/soap-tools/chromAccession.py | 2 +-
extras/soap-tools/descriptionExtract.py | 2 +-
extras/soap-tools/getCache.py | 2 +-
extras/soap-tools/getGeneAndTranscript.py | 2 +-
extras/soap-tools/getGeneName.py | 2 +-
extras/soap-tools/getTranscripts.py | 2 +-
extras/soap-tools/getTranscriptsAndInfo.py | 2 +-
extras/soap-tools/getTranscriptsByGeneName.py | 2 +-
extras/soap-tools/getTranscriptsMapping.py | 2 +-
extras/soap-tools/getdbSNPDescriptions.py | 2 +-
extras/soap-tools/info.py | 2 +-
extras/soap-tools/mappingInfo.py | 2 +-
extras/soap-tools/numberConversion.py | 2 +-
extras/soap-tools/runMutalyzer.py | 2 +-
extras/soap-tools/run_batch_job.py | 2 +-
extras/soap-tools/sliceChromosomeByGene.py | 2 +-
extras/soap-tools/transcriptInfo.py | 2 +-
18 files changed, 18 insertions(+), 18 deletions(-)
diff --git a/extras/soap-tools/checkSyntax.py b/extras/soap-tools/checkSyntax.py
index a2bf32d7..41d99a3d 100755
--- a/extras/soap-tools/checkSyntax.py
+++ b/extras/soap-tools/checkSyntax.py
@@ -22,7 +22,7 @@ from suds.client import Client
from mutalyzer.util import format_usage
-WSDL_LOCATION = 'http://localhost/mutalyzer/services/?wsdl'
+WSDL_LOCATION = 'http://127.0.0.1:8081/?wsdl'
def main(description):
diff --git a/extras/soap-tools/chromAccession.py b/extras/soap-tools/chromAccession.py
index 457277d8..45c638d0 100755
--- a/extras/soap-tools/chromAccession.py
+++ b/extras/soap-tools/chromAccession.py
@@ -23,7 +23,7 @@ from suds.client import Client
from mutalyzer.util import format_usage
-WSDL_LOCATION = 'http://localhost/mutalyzer/services/?wsdl'
+WSDL_LOCATION = 'http://127.0.0.1:8081/?wsdl'
def main(chromosome, build='hg19'):
diff --git a/extras/soap-tools/descriptionExtract.py b/extras/soap-tools/descriptionExtract.py
index 3889ca41..c67952b1 100755
--- a/extras/soap-tools/descriptionExtract.py
+++ b/extras/soap-tools/descriptionExtract.py
@@ -24,7 +24,7 @@ from suds.client import Client
from mutalyzer.util import format_usage
-WSDL_LOCATION = 'http://localhost/mutalyzer/services/?wsdl'
+WSDL_LOCATION = 'http://127.0.0.1:8081/?wsdl'
def main(reference, observed):
diff --git a/extras/soap-tools/getCache.py b/extras/soap-tools/getCache.py
index 07a86818..e425aa4b 100755
--- a/extras/soap-tools/getCache.py
+++ b/extras/soap-tools/getCache.py
@@ -23,7 +23,7 @@ from suds.client import Client
from mutalyzer.util import format_usage
-WSDL_LOCATION = 'http://localhost/mutalyzer/services/?wsdl'
+WSDL_LOCATION = 'http://127.0.0.1:8081/?wsdl'
def main(days):
diff --git a/extras/soap-tools/getGeneAndTranscript.py b/extras/soap-tools/getGeneAndTranscript.py
index e4ba939b..9891a416 100755
--- a/extras/soap-tools/getGeneAndTranscript.py
+++ b/extras/soap-tools/getGeneAndTranscript.py
@@ -23,7 +23,7 @@ from suds.client import Client
from mutalyzer.util import format_usage
-WSDL_LOCATION = 'http://localhost/mutalyzer/services/?wsdl'
+WSDL_LOCATION = 'http://127.0.0.1:8081/?wsdl'
def main(genomic_reference, transcript_reference):
diff --git a/extras/soap-tools/getGeneName.py b/extras/soap-tools/getGeneName.py
index ad4ce8c4..8993844f 100755
--- a/extras/soap-tools/getGeneName.py
+++ b/extras/soap-tools/getGeneName.py
@@ -23,7 +23,7 @@ from suds.client import Client
from mutalyzer.util import format_usage
-WSDL_LOCATION = 'http://localhost/mutalyzer/services/?wsdl'
+WSDL_LOCATION = 'http://127.0.0.1:8081/?wsdl'
def main(transcript, build='hg19'):
diff --git a/extras/soap-tools/getTranscripts.py b/extras/soap-tools/getTranscripts.py
index 82af3219..1c086dd6 100755
--- a/extras/soap-tools/getTranscripts.py
+++ b/extras/soap-tools/getTranscripts.py
@@ -23,7 +23,7 @@ from suds.client import Client
from mutalyzer.util import format_usage
-WSDL_LOCATION = 'http://localhost/mutalyzer/services/?wsdl'
+WSDL_LOCATION = 'http://127.0.0.1:8081/?wsdl'
def main(chromosome, position):
diff --git a/extras/soap-tools/getTranscriptsAndInfo.py b/extras/soap-tools/getTranscriptsAndInfo.py
index 12b94d86..f68b10a5 100755
--- a/extras/soap-tools/getTranscriptsAndInfo.py
+++ b/extras/soap-tools/getTranscriptsAndInfo.py
@@ -24,7 +24,7 @@ from suds.client import Client
from mutalyzer.util import format_usage
-WSDL_LOCATION = 'http://localhost/mutalyzer/services/?wsdl'
+WSDL_LOCATION = 'http://127.0.0.1:8081/?wsdl'
def main(genomic_reference, gene=None):
diff --git a/extras/soap-tools/getTranscriptsByGeneName.py b/extras/soap-tools/getTranscriptsByGeneName.py
index f31ff6ba..661302aa 100755
--- a/extras/soap-tools/getTranscriptsByGeneName.py
+++ b/extras/soap-tools/getTranscriptsByGeneName.py
@@ -22,7 +22,7 @@ from suds.client import Client
from mutalyzer.util import format_usage
-WSDL_LOCATION = 'http://localhost/mutalyzer/services/?wsdl'
+WSDL_LOCATION = 'http://127.0.0.1:8081/?wsdl'
def main(gene):
diff --git a/extras/soap-tools/getTranscriptsMapping.py b/extras/soap-tools/getTranscriptsMapping.py
index 891dfa75..6429104a 100755
--- a/extras/soap-tools/getTranscriptsMapping.py
+++ b/extras/soap-tools/getTranscriptsMapping.py
@@ -26,7 +26,7 @@ from suds.client import Client
from mutalyzer.util import format_usage
-WSDL_LOCATION = 'http://localhost/mutalyzer/services/?wsdl'
+WSDL_LOCATION = 'http://127.0.0.1:8081/?wsdl'
def main(build, chromosome, pos1, pos2, tolerant=0):
diff --git a/extras/soap-tools/getdbSNPDescriptions.py b/extras/soap-tools/getdbSNPDescriptions.py
index 5be99c73..3b58146c 100755
--- a/extras/soap-tools/getdbSNPDescriptions.py
+++ b/extras/soap-tools/getdbSNPDescriptions.py
@@ -22,7 +22,7 @@ from suds.client import Client
from mutalyzer.util import format_usage
-WSDL_LOCATION = 'http://localhost/mutalyzer/services/?wsdl'
+WSDL_LOCATION = 'http://127.0.0.1:8081/?wsdl'
def main(rs_number):
diff --git a/extras/soap-tools/info.py b/extras/soap-tools/info.py
index 1a4ea6e4..d5ab773e 100755
--- a/extras/soap-tools/info.py
+++ b/extras/soap-tools/info.py
@@ -21,7 +21,7 @@ from suds.client import Client
from mutalyzer.util import format_usage
-WSDL_LOCATION = 'http://localhost/mutalyzer/services/?wsdl'
+WSDL_LOCATION = 'http://127.0.0.1:8081/?wsdl'
def main():
diff --git a/extras/soap-tools/mappingInfo.py b/extras/soap-tools/mappingInfo.py
index 7a473b1c..33e0716f 100755
--- a/extras/soap-tools/mappingInfo.py
+++ b/extras/soap-tools/mappingInfo.py
@@ -24,7 +24,7 @@ from suds.client import Client
from mutalyzer.util import format_usage
-WSDL_LOCATION = 'http://localhost/mutalyzer/services/?wsdl'
+WSDL_LOCATION = 'http://127.0.0.1:8081/?wsdl'
def main(transcript, variant, build='hg19'):
diff --git a/extras/soap-tools/numberConversion.py b/extras/soap-tools/numberConversion.py
index bd5262f4..01f93b1f 100755
--- a/extras/soap-tools/numberConversion.py
+++ b/extras/soap-tools/numberConversion.py
@@ -23,7 +23,7 @@ from suds.client import Client
from mutalyzer.util import format_usage
-WSDL_LOCATION = 'http://localhost/mutalyzer/services/?wsdl'
+WSDL_LOCATION = 'http://127.0.0.1:8081/?wsdl'
def main(build, description):
diff --git a/extras/soap-tools/runMutalyzer.py b/extras/soap-tools/runMutalyzer.py
index 475cc6c1..7495b019 100755
--- a/extras/soap-tools/runMutalyzer.py
+++ b/extras/soap-tools/runMutalyzer.py
@@ -23,7 +23,7 @@ from suds.client import Client
from mutalyzer.util import format_usage
-WSDL_LOCATION = 'http://localhost/mutalyzer/services/?wsdl'
+WSDL_LOCATION = 'http://127.0.0.1:8081/?wsdl'
def main(description, verbosity=None):
diff --git a/extras/soap-tools/run_batch_job.py b/extras/soap-tools/run_batch_job.py
index bda04032..1a031827 100755
--- a/extras/soap-tools/run_batch_job.py
+++ b/extras/soap-tools/run_batch_job.py
@@ -16,7 +16,7 @@ import time
from suds.client import Client
-URL = "https://mutalyzer.nl/services/?wsdl"
+URL = 'http://127.0.0.1:8081/?wsdl'
job_types = ["NameChecker", "SyntaxChecker", "PositionConverter",
"SnpConverter"]
RETRY_WAIT = 1
diff --git a/extras/soap-tools/sliceChromosomeByGene.py b/extras/soap-tools/sliceChromosomeByGene.py
index c4e0e418..199f03e5 100755
--- a/extras/soap-tools/sliceChromosomeByGene.py
+++ b/extras/soap-tools/sliceChromosomeByGene.py
@@ -24,7 +24,7 @@ from suds import WebFault
from mutalyzer.util import format_usage
-WSDL_LOCATION = 'http://localhost/mutalyzer/services/?wsdl'
+WSDL_LOCATION = 'http://127.0.0.1:8081/?wsdl'
def main(gene):
diff --git a/extras/soap-tools/transcriptInfo.py b/extras/soap-tools/transcriptInfo.py
index bd9c14e8..f3974dcb 100755
--- a/extras/soap-tools/transcriptInfo.py
+++ b/extras/soap-tools/transcriptInfo.py
@@ -22,7 +22,7 @@ from suds.client import Client
from mutalyzer.util import format_usage
-WSDL_LOCATION = 'http://localhost/mutalyzer/services/?wsdl'
+WSDL_LOCATION = 'http://127.0.0.1:8081/?wsdl'
def main(transcript):
--
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