From 0ae9dde3c849198165b5f2e07024e4799c2db354 Mon Sep 17 00:00:00 2001
From: Martijn Vermaat <martijn@vermaat.name>
Date: Tue, 29 May 2012 14:10:54 +0000
Subject: [PATCH] Add HTTP/RPC+JSON unit tests
git-svn-id: https://humgenprojects.lumc.nl/svn/mutalyzer/branches/rpclib-branch@541 eb6bd6ab-9ccd-42b9-aceb-e2899b4a52f1
---
tests/test_services_json.py | 68 +++++++++++++++++++
...st_webservice.py => test_services_soap.py} | 3 +-
2 files changed, 69 insertions(+), 2 deletions(-)
create mode 100644 tests/test_services_json.py
rename tests/{test_webservice.py => test_services_soap.py} (99%)
diff --git a/tests/test_services_json.py b/tests/test_services_json.py
new file mode 100644
index 00000000..6055a185
--- /dev/null
+++ b/tests/test_services_json.py
@@ -0,0 +1,68 @@
+"""
+Tests for the SOAP interface to Mutalyzer.
+"""
+
+
+from urllib import urlencode
+import simplejson as json
+import requests
+from nose.tools import *
+import mutalyzer
+
+
+SERVICE_ROOT = 'http://localhost/mutalyzer/json/'
+
+
+def call(method, **kwargs):
+ """
+ Do a HTTP/RPC request and decode the JSON response.
+ """
+ r = requests.get(SERVICE_ROOT + method + '?' + urlencode(kwargs))
+ return json.loads(r.content)
+
+
+class TestServicesJson():
+ """
+ Test the Mutalyzer HTTP/RPC+JSON interface.
+ """
+ def test_checksyntax_valid(self):
+ """
+ Running checkSyntax with a valid variant name should return True.
+ """
+ r = call('checkSyntax', variant='AB026906.1:c.274G>T')
+ assert_equal(r['CheckSyntaxOutput']['valid'], True)
+
+ def test_checksyntax_invalid(self):
+ """
+ Running checkSyntax with an invalid variant name should return False
+ and give at least one error message.
+ """
+ r = call('checkSyntax', variant='0:abcd')
+ assert_equal(r['CheckSyntaxOutput']['valid'], False)
+ assert len(r['CheckSyntaxOutput']['messages']['SoapMessage']) >= 1
+
+ def test_checksyntax_empty(self):
+ """
+ Running checkSyntax with no variant name should raise exception.
+ """
+ r = call('checkSyntax')
+ assert r['Fault']
+
+ def test_transcriptinfo_valid(self):
+ """
+ Running transcriptInfo with valid arguments should get us a Transcript
+ object.
+ """
+ r = call('transcriptInfo', LOVD_ver='123', build='hg19',
+ accNo='NM_002001.2')
+ assert_equal(r['Transcript']['trans_start'], -99)
+ assert_equal(r['Transcript']['trans_stop'], 1066)
+ assert_equal(r['Transcript']['CDS_stop'], 774)
+
+ def test_info(self):
+ """
+ Running the info method should give us some version information.
+ """
+ r = call('info')
+ assert_equal(type(r['InfoOutput']['versionParts']['string']), list)
+ assert_equal(r['InfoOutput']['version'], mutalyzer.__version__)
diff --git a/tests/test_webservice.py b/tests/test_services_soap.py
similarity index 99%
rename from tests/test_webservice.py
rename to tests/test_services_soap.py
index 8dabe7b3..0fdbec9a 100644
--- a/tests/test_webservice.py
+++ b/tests/test_services_soap.py
@@ -46,11 +46,10 @@ class TestWSDL():
assert 'name="Mutalyzer"' in wsdl
-class TestWebservice():
+class TestServicesSoap():
"""
Test the Mutalyzer SOAP interface.
"""
-
def setUp(self):
"""
Initialize webservice entrypoint.
--
GitLab