From 09d17e296a87171d9bb7752a5ea8b9647a496dc9 Mon Sep 17 00:00:00 2001
From: Martijn Vermaat <martijn@vermaat.name>
Date: Fri, 18 Sep 2015 10:38:29 +0200
Subject: [PATCH] Add Baker's yeast (SacCer_Apr2011/sacCer3) assembly
---
extras/assemblies/SacCer_Apr2011.json | 93 +++++++++++++++++++++++++++
1 file changed, 93 insertions(+)
create mode 100644 extras/assemblies/SacCer_Apr2011.json
diff --git a/extras/assemblies/SacCer_Apr2011.json b/extras/assemblies/SacCer_Apr2011.json
new file mode 100644
index 00000000..1405624f
--- /dev/null
+++ b/extras/assemblies/SacCer_Apr2011.json
@@ -0,0 +1,93 @@
+{
+ "name": "SacCer_Apr2011",
+ "alias": "sacCer3",
+ "taxonomy_id": 4932,
+ "taxonomy_common_name": "Saccharomyces cerevisiae",
+ "chromosomes": [
+ {
+ "organelle": "nucleus",
+ "name": "chrI",
+ "accession": "BK006935.2"
+ },
+ {
+ "organelle": "nucleus",
+ "name": "chrII",
+ "accession": "BK006936.2"
+ },
+ {
+ "organelle": "nucleus",
+ "name": "chrIII",
+ "accession": "BK006937.2"
+ },
+ {
+ "organelle": "nucleus",
+ "name": "chrIV",
+ "accession": "BK006938.2"
+ },
+ {
+ "organelle": "nucleus",
+ "name": "chrV",
+ "accession": "BK006939.2"
+ },
+ {
+ "organelle": "nucleus",
+ "name": "chrVI",
+ "accession": "BK006940.2"
+ },
+ {
+ "organelle": "nucleus",
+ "name": "chrVII",
+ "accession": "BK006941.2"
+ },
+ {
+ "organelle": "nucleus",
+ "name": "chrVIII",
+ "accession": "BK006934.2"
+ },
+ {
+ "organelle": "nucleus",
+ "name": "chrIX",
+ "accession": "BK006942.2"
+ },
+ {
+ "organelle": "nucleus",
+ "name": "chrX",
+ "accession": "BK006943.2"
+ },
+ {
+ "organelle": "nucleus",
+ "name": "chrXI",
+ "accession": "BK006944.2"
+ },
+ {
+ "organelle": "nucleus",
+ "name": "chrXII",
+ "accession": "BK006945.2"
+ },
+ {
+ "organelle": "nucleus",
+ "name": "chrXIII",
+ "accession": "BK006946.2"
+ },
+ {
+ "organelle": "nucleus",
+ "name": "chrXIV",
+ "accession": "BK006947.3"
+ },
+ {
+ "organelle": "nucleus",
+ "name": "chrXV",
+ "accession": "BK006948.2"
+ },
+ {
+ "organelle": "nucleus",
+ "name": "chrXVI",
+ "accession": "BK006949.2"
+ },
+ {
+ "organelle": "mitochondrion",
+ "name": "chrM",
+ "accession": "AJ011856.1"
+ }
+ ]
+}
--
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