From 0088b7a141b48dcf14ccd5ed2b4ec027e4fac583 Mon Sep 17 00:00:00 2001
From: Martijn Vermaat <martijn@vermaat.name>
Date: Thu, 22 Jan 2015 17:27:48 +0100
Subject: [PATCH] Catch unknown reference in getTranscriptsAndInfo
---
mutalyzer/services/rpc.py | 4 ++++
1 file changed, 4 insertions(+)
diff --git a/mutalyzer/services/rpc.py b/mutalyzer/services/rpc.py
index 27c3410b..fe79c8d1 100644
--- a/mutalyzer/services/rpc.py
+++ b/mutalyzer/services/rpc.py
@@ -949,6 +949,10 @@ class MutalyzerService(ServiceBase):
retriever = Retriever.GenBankRetriever(O)
record = retriever.loadrecord(genomicReference)
+ if record is None:
+ raise Fault("EARG",
+ "Unknown reference file: %s" % genomicReference)
+
# Todo: If loadRecord failed (e.g. DTD missing), we should abort here.
GenRecordInstance = GenRecord.GenRecord(O)
GenRecordInstance.record = record
--
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