Commits · 3929f40f317afdb6150b5be2d0a1dee36ec84d8e · Mirrors / extractor

14 Sep, 2016 1 commit
- Added the Crossmapper module · 3929f40f
  jkvis authored Sep 14, 2016
  
  3929f40f
13 Sep, 2016 3 commits
- Fixed description for no repeat structures · 0853cced
  jkvis authored Sep 13, 2016
  
  0853cced
- Fixed repeat structure within variants · fba10c7e
  jkvis authored Sep 13, 2016
  
  fba10c7e
- Fixed separate masking and repeat extraction · 57113309
  jkvis authored Sep 13, 2016
  
  57113309
12 Sep, 2016 3 commits
- Fixed indexing outside repeat structure · 616db5a6
  jkvis authored Sep 12, 2016
  
  616db5a6
- Added start and end repeat structure extraction · b1e22988
  jkvis authored Sep 12, 2016
  
  b1e22988
- Added repeat extractor · 82e1ba61
  jkvis authored Sep 12, 2016
  
  82e1ba61
21 Jun, 2016 2 commits
- Fixed potential bug with inserted suffix in frame shifts · 1bce474c
  jkvis authored Jun 21, 2016
  
  1bce474c
- Fixed an error in inserted prefix sequences in frame shifts · f37c14b8
  jkvis authored Jun 21, 2016
  
  f37c14b8
07 Mar, 2016 3 commits
- Fixed missing inserted sequence for inversions · 353d910f
  jkvis authored Mar 07, 2016
  
  353d910f
- Protein description tests · 827445d0
  jkvis authored Mar 07, 2016
  
  827445d0
- Fixed inserted region around frameshifts · 1c658af5
  jkvis authored Mar 07, 2016
  
  1c658af5
01 Sep, 2015 1 commit
- Prototype of extended hgvs protein annotation. · a7a933a5
  Laros authored Sep 01, 2015
  
  a7a933a5
13 Aug, 2015 1 commit
- Work in progress, added protein variant description. · d544c92b
  Laros authored Aug 13, 2015
  
  d544c92b
16 Jul, 2015 1 commit
- Added BioPython dependency, generalised protein extraction for other organisms. · 565c412c
  Laros authored Jul 16, 2015
  
  565c412c
30 Jun, 2015 1 commit
- First working prototype of protein describe function. · d8aa6057
  Laros authored Jun 30, 2015
  
  d8aa6057
29 Jun, 2015 1 commit
- Added protein allele descriptions (work in progress). · 23031a60
  Laros authored Jun 29, 2015
  
  23031a60
30 Apr, 2015 3 commits
- Use constant definitions from extractor for string type · a4a4200c
  Vermaat authored Apr 23, 2015
  
  a4a4200c
- Support Python 2.6 · 57b0f780
  Vermaat authored Apr 23, 2015
  
  57b0f780
- Support Python 3.3 and 3.4 · 3d731525
  Vermaat authored Apr 23, 2015
```
This fixes issues related to different SWIG handling of unicode strings
between Python 2 and Python 3.

We also provide convenient package-level imports for the public API
functions and clean up packaging.
```
  3d731525
23 Apr, 2015 1 commit
- Removed obsolete prototype code. · 396973f5
  Jeroen F.J. Laros authored Apr 23, 2015
  
  396973f5
19 Apr, 2015 3 commits
- Travis tests. · 4f72235d
  Jeroen F.J. Laros authored Apr 19, 2015
  
  4f72235d
- Removed BioPython dependency. · ec57cd17
  Jeroen F.J. Laros authored Apr 19, 2015
  
  ec57cd17
- Added describe functionality from Mutalyzer. · 45bbabc5
  Jeroen F.J. Laros authored Apr 19, 2015
  
  45bbabc5