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bamstats Loading commit data...
flagstat Loading commit data...
refflatstats Loading commit data...
AnnotateVcfWithBedTest.scala Loading commit data...
BaseCounterTest.scala Loading commit data...
BastyGenerateFastaTest.scala Loading commit data...
CheckAllelesVcfInBamTest.scala Loading commit data...
DownloadNcbiAssemblyTest.scala Loading commit data...
ExtractAlignedFastqTest.scala Loading commit data...
FastqFilterTest.scala Loading commit data...
FastqSplitterTest.scala Loading commit data...
FastqSyncTest.scala Loading commit data...
FindOverlapMatchTest.scala Loading commit data...
FindRepeatsPacBioTest.scala Loading commit data...
GensToVcfTest.scala Loading commit data...
GvcfToBedTest.scala Loading commit data...
MergeAllelesTest.scala Loading commit data...
MergeTablesTest.scala Loading commit data...
MpileupToVcfTest.scala Loading commit data...
MultiCoverageTest.scala Loading commit data...
NcbiReportToContigMapTest.scala Loading commit data...
PrefixFastqTest.scala Loading commit data...
ReplaceContigsGtfFileTest.scala Loading commit data...
SageCountFastqTest.scala Loading commit data...
SageCreateLibaryTest.scala Loading commit data...
SageCreateTagCountsTest.scala Loading commit data...
SamplesTsvToConfigTest.scala Loading commit data...
SeqStatTest.scala Loading commit data...
SnptestToVcfTest.scala Loading commit data...
SummaryToTsvTest.scala Loading commit data...
ValidateFastqTest.scala Loading commit data...
ValidateVcfTest.scala Loading commit data...
VcfFilterTest.scala Loading commit data...
VcfStatsTest.scala Loading commit data...
VcfToTsvTest.scala Loading commit data...
VcfWithVcfTest.scala Loading commit data...
VepNormalizerTest.scala Loading commit data...
WipeReadsTest.scala Loading commit data...