Commit f5a34e64 authored by akaljuvee's avatar akaljuvee

-

parent da7e32e7
......@@ -80,7 +80,7 @@ class ShivaSvCalling(val root: Configurable) extends QScript with SummaryQScript
add(mergeSVcalls)
outputMergedVCFbySample += (sample -> mergeSVcalls.output)
} else {
outputMergedVCFbySample += (sample -> callers.head.outputVCF(sample))
outputMergedVCFbySample += (sample -> callers.head.outputVCF(sample).get)
}
}
......
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