Commit ec76354d authored by rhpvorderman's avatar rhpvorderman

Added varscan home page to the shiva pipeline documentation

parent d1108871
...@@ -103,8 +103,10 @@ At this moment the following variant callers can be used ...@@ -103,8 +103,10 @@ At this moment the following variant callers can be used
* <a href="https://samtools.github.io/bcftools/bcftools.html">bcftools</a> * <a href="https://samtools.github.io/bcftools/bcftools.html">bcftools</a>
* <a href="https://samtools.github.io/bcftools/bcftools.html">bcftools_singlesample</a> * <a href="https://samtools.github.io/bcftools/bcftools.html">bcftools_singlesample</a>
* <a href="https://github.com/ekg/freebayes">freebayes</a> * <a href="https://github.com/ekg/freebayes">freebayes</a>
* <a href="http://varscan.sourceforge.net/">varscan</a>
* [raw](../tools/MpileupToVcf) * [raw](../tools/MpileupToVcf)
## Config options ## Config options
To view all possible config options please navigate to our Gitlab wiki page To view all possible config options please navigate to our Gitlab wiki page
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