Commit cb93552e authored by bow's avatar bow

Merge branch 'fix-mapping_plot' into 'develop'

Fix mapping plot in report

Fixes #349 

See merge request !411
parents 160ed2d3 00bf2bf3
......@@ -127,9 +127,9 @@ object BammetricsReport extends ReportBuilder {
summary, Some(sample), lib).value.getOrElse(0).toString.toLong
val sb = new StringBuffer()
if (lib.isDefined) sb.append(sample + "-" + lib.get + "\t") else sb.append(sample + "\t")
sb.append((mapped - duplicates) + "\t")
sb.append((mapped - duplicates - secondary) + "\t")
sb.append(duplicates + "\t")
sb.append((total - mapped - secondary) + "\t")
sb.append((total - mapped) + "\t")
sb.append(secondary)
sb.toString
}
......
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