Commit ae0a5dfd authored by rhpvorderman's avatar rhpvorderman

Fix outputname issue

parent 865f33cf
......@@ -56,12 +56,7 @@ class GearsSingle(val parent: Configurable) extends QScript with SummaryQScript
if (sampleId == null || sampleId == None) Logging.addError("Missing sample ID on GearsSingle module")
if (outputName == null) {
if (fastqR1.nonEmpty) outputName =
else outputName =".bam")).getOrElse("noName")
outputName = sampleId.getOrElse("noName") +"-" + _).getOrElse("")
if (fastqR1.nonEmpty) {
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