Commit 957aa6c5 authored by Wai Yi Leung's avatar Wai Yi Leung

change "download" links to buttons

parent bb2dac47
package nl.lumc.sasc.biopet.pipelines.tinycap
import nl.lumc.sasc.biopet.core.report.ReportBuilderExtension
import nl.lumc.sasc.biopet.core.{PipelineCommand, Reference}
import nl.lumc.sasc.biopet.core.{ PipelineCommand, Reference }
import nl.lumc.sasc.biopet.extensions.HtseqCount
import nl.lumc.sasc.biopet.pipelines.mapping.MultisampleMappingTrait
import nl.lumc.sasc.biopet.utils.config.Configurable
......
package nl.lumc.sasc.biopet.pipelines.tinycap
import nl.lumc.sasc.biopet.core.report.{ReportPage, ReportSection, ReportBuilderExtension}
import nl.lumc.sasc.biopet.core.report.{ ReportPage, ReportSection, ReportBuilderExtension }
import nl.lumc.sasc.biopet.pipelines.mapping.MultisampleMappingReportTrait
import nl.lumc.sasc.biopet.utils.config.Configurable
/**
* Created by wyleung on 4-2-16.
*/
* Created by wyleung on 4-2-16.
*/
class TinyCapReport(val root: Configurable) extends ReportBuilderExtension {
def builder = TinyCapReport
......@@ -21,7 +21,6 @@ object TinyCapReport extends MultisampleMappingReportTrait {
override def pipelineName = "tinycap"
/** Root page for the carp report */
override def indexPage = {
......@@ -57,6 +56,4 @@ object TinyCapReport extends MultisampleMappingReportTrait {
)
}
}
......@@ -52,7 +52,7 @@
<button type="button" class="btn btn-info" data-toggle="collapse" data-target="#alignmentSummaryTable">
<i class="glyphicon glyphicon-eye-open"></i> Show table</button>
#end
<button type="button" class="btn btn-info"><i class="glyphicon glyphicon-cloud-download"> <a href="alignmentSummary.tsv">TSV file</a></i></button>
<a href="alignmentSummary.tsv"><button type="button" class="btn btn-info"><i class="glyphicon glyphicon-cloud-download"></i> TSV file</button></a>
</div>
#end
<div class="panel-body collapse #if (showTable)in#end" id="alignmentSummaryTable">
......
......@@ -47,7 +47,7 @@
#else
<button type="button" class="btn btn-info" data-toggle="collapse" data-target="#rnaTable">Show table</button>
#end
<i class="glyphicon glyphicon-file"></i> <a href="rna.tsv">tsv file</a>
<a href="rna.tsv"><button type="button" class="btn btn-info"><i class="glyphicon glyphicon-cloud-download"></i> TSV file</button></a>
</div>
#end
......
......@@ -47,7 +47,7 @@
#else
<button type="button" class="btn btn-info" data-toggle="collapse" data-target="#wgsTable">Show table</button>
#end
<i class="glyphicon glyphicon-file"></i> <a href="wgs.tsv">tsv file</a>
<a href="wgs.tsv"><button type="button" class="btn btn-info"><i class="glyphicon glyphicon-cloud-download"></i> TSV file</button></a>
</div>
#end
......
......@@ -76,8 +76,10 @@
#else
<button type="button" class="btn btn-info" data-toggle="collapse" data-target="#QC_BasesTable">Show table</button>
#end
<i class="glyphicon glyphicon-file"></i> <a href="QC_Bases_R1.tsv">R1 reads stats</a> -
<i class="glyphicon glyphicon-file"></i> <a href="QC_Bases_R2.tsv">R2 reads stats</a>
<a href="QC_Bases_R1.tsv"><button type="button" class="btn btn-info"><i class="glyphicon glyphicon-cloud-download"></i> R1 base stats</button></a>
<a href="QC_Bases_R2.tsv"><button type="button" class="btn btn-info"><i class="glyphicon glyphicon-cloud-download"></i> R2 base stats</button></a>
</div>
#end
......
......@@ -82,8 +82,10 @@
#else
<button type="button" class="btn btn-info" data-toggle="collapse" data-target="#QC_ReadsTable">Show table</button>
#end
<i class="glyphicon glyphicon-file"></i> <a href="QC_Reads_R1.tsv">R1 reads stats</a> -
<i class="glyphicon glyphicon-file"></i> <a href="QC_Reads_R2.tsv">R2 reads stats</a>
<a href="QC_Reads_R1.tsv"><button type="button" class="btn btn-info"><i class="glyphicon glyphicon-cloud-download"></i> R1 reads stats</button></a>
<a href="QC_Reads_R2.tsv"><button type="button" class="btn btn-info"><i class="glyphicon glyphicon-cloud-download"></i> R2 reads stats</button></a>
</div>
#end
......
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